Peribacillus psychrosaccharolyticus: I6J18_20030
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Entry
I6J18_20030 CDS
T07206
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Pathway
ppsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I6J18_20030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsr03400
]
I6J18_20030
Enzymes [BR:
ppsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I6J18_20030
DNA repair and recombination proteins [BR:
ppsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6J18_20030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
nSTAND3
T2SSE
AAA_16
AAA
AAA_5
AAA_28
NTPase_1
NPHP3_N
HHH_5
DEAD
UvrD_C
AAA_17
TsaE
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QQS99846
UniProt:
A0A974RZR4
LinkDB
All DBs
Position
3989894..3992323
Genome browser
AA seq
809 aa
AA seq
DB search
MVQDSMDLFSEEKPFMKGRHLVTIFHNEQNMYSVVRIRVDETNLSYEEKEAVVTGYFPRI
HEDETYTFYGNMKEHARFGLQFHVEHFRKEMPQTKDGIVSYLSSDLFKGIGKKTAESIVD
TLGENAISRILAQPSLLDSIPKLAGEKAKTFYDTLVEHQGLEQVMIALNQYGFGPQLSMK
IYQTYKQETISLLQKNPYQLVEDIEGIGFGRADELGSQLGLNGSHPDRIKAACLYTLESQ
CAQEGNVYLEAEQLLESVKALLEDNQGAEIAFADISAEVIKLEEEKKIIVEERRVYTPSL
YYSERGIVKSIKKLLAQDEYEEQFPESEFLLALGELEERLGVEYAPAQQEAIQTALQSPM
MILTGGPGTGKTTVIKGIVELYSELHGVSMDIGTYKADEPFPFVLAAPTGRAAKRMAEST
GLPAVTIHRLLGWNGADGFAHDEDNPLSGRIVIIDEMSMVDTWLAHQLLKALPEHVQLIL
VGDEDQLPSVGPGQVLKDLLASGSVPMVGLEQIYRQADGSSIIELAHEIKRGQLPSDFSK
QQTDRSFIRCGSGQIAQVVEKVVANAKSKGFTARDVQVLAPMYRGPAGIDNLNKILQEVF
NANTDKKKRELKFGDVVYRTGDKVLQLVNQPESGVYNGDMGDIVSVLYAKENTDNVDKLV
LSFDGIEVVYAKQELGQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAITR
SKNFLILCGEEDAFRQGIERNSETNRKTTLQQKLSSYIAGNGMNEERPVEDEGETAQTTA
AATTEDYIEALMKVDPMIGMDYVTPDDFI
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggattcgatggatctctttagtgaggagaagccgtttatgaaggggcgccat
ttggtgacgatttttcataatgaacaaaatatgtattccgttgttagaattcgggtcgat
gagacgaatttgagctatgaggaaaaagaagcagtcgtcaccggctactttccgcgtatc
catgaggatgaaacgtatacgttttacgggaatatgaaagagcatgcgcgatttggactt
cagtttcatgttgagcattttcgaaaagaaatgcctcagacgaaggacggaattgttagt
tatttgtcgagcgatttatttaaaggcatcggtaaaaaaacggctgaaagcattgtcgat
acgcttggtgagaacgcgatttcaaggattcttgctcagccatcgctgcttgacagcatt
ccgaaacttgctggtgaaaaagcgaagacgttttacgacacactcgttgagcaccaagga
ctagagcaagtaatgattgccctgaatcaatacggatttggtccacagttgtcaatgaaa
atctatcaaacgtacaaacaagaaacgattagtttgttacaaaaaaatccctatcagctt
gttgaggatattgagggcattggatttggacgtgcagatgaactaggttctcagcttggt
ttaaacggtagtcatcctgaccgaattaaggcggcgtgtttatatacgctcgagtcacag
tgcgctcaagaaggcaatgtctatcttgaggcggagcagctgctggaaagtgtgaaagca
ctgcttgaagataatcagggagctgaaattgcgtttgcggatatatcagcagaagtgatt
aagcttgaagaagaaaagaaaattattgttgaagagcgtcgggtctataccccgtcgctg
tattattctgagcgaggcattgtaaagagtattaagaaattgctggcacaggatgaatac
gaagagcagtttcctgagtcggaatttttactggcacttggtgagcttgaggagcgtctt
ggtgttgagtatgcaccggcgcagcaagaagccattcagacagctctgcagtcgccaatg
atgattcttactggtggacctggtacaggaaaaacgacggttataaaaggaattgttgag
ctgtacagtgaactccatggagtgtcgatggatattggcacttacaaagcggacgagcca
tttccctttgtgcttgcagcgccgacgggccgtgcagcaaaacggatggccgaatcaact
ggattaccggctgtgacgatccatcgtttgctcggatggaacggtgcggatggctttgcg
catgatgaagacaatccgctttcaggccgaatcgttattattgatgagatgtcgatggtt
gatacttggcttgcgcatcagctgttgaaggctttacccgagcatgttcagttgattttg
gtaggagatgaagatcagctgccatcggttggaccaggtcaagtgttgaaagatttattg
gcatcaggcagtgttccaatggtaggtctcgagcaaatttatcgtcaagcggatggctca
tccattattgagcttgcccatgaaattaaacgcggccagctgccgagtgacttttcaaag
caacagactgatcgctcgttcattcgctgcgggtcggggcagattgcccaggttgttgaa
aaggttgtcgcgaatgctaagtccaagggattcaccgcccgtgatgttcaggttctggca
cccatgtaccgtggcccggccggaattgataatcttaataaaattttgcaagaagtattt
aatgcaaatacggataagaaaaagcgtgagttaaagtttggtgatgtggtttatcggaca
ggcgacaaagtactgcaactggtcaatcagccggaaagcggcgtgtacaatggcgacatg
ggagatattgtgtcggtcctgtatgccaaagagaatacggataatgttgataagctcgtg
ctttcgtttgatggcattgaagtggtttatgccaagcaagagctcggacaaatcacacat
gcttattgctgctctattcataaatcacagggtagtgaatttccaattgttattttacca
gttgtaaaaagctattaccgtatgctccggcggaatctgctctacactgccattacaagg
agtaaaaacttcttaattttgtgcggcgaggaagatgcctttcgtcaaggcattgagcga
aatagcgaaacaaaccgcaaaaccacactgcagcaaaaactaagcagttacattgcgggt
aatggtatgaacgaagaacgtccggtagaggatgaaggcgaaacagcccaaaccacagcc
gccgccacaacagaagactatatcgaagcactcatgaaagtcgaccccatgatcggcatg
gactacgtaaccccagatgacttcatctaa
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