Peribacillus psychrosaccharolyticus: I6J18_20270
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Entry
I6J18_20270 CDS
T07206
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Pathway
ppsr03030
DNA replication
ppsr03430
Mismatch repair
ppsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J18_20270 (holA)
03430 Mismatch repair
I6J18_20270 (holA)
03440 Homologous recombination
I6J18_20270 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsr03032
]
I6J18_20270 (holA)
03400 DNA repair and recombination proteins [BR:
ppsr03400
]
I6J18_20270 (holA)
Enzymes [BR:
ppsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J18_20270 (holA)
DNA replication proteins [BR:
ppsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6J18_20270 (holA)
DNA repair and recombination proteins [BR:
ppsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6J18_20270 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DNA_pol3_gamma3
DUF1848
Motif
Other DBs
NCBI-ProteinID:
QQS99892
UniProt:
A0A974S010
LinkDB
All DBs
Position
4033991..4035004
Genome browser
AA seq
337 aa
AA seq
DB search
MVLDVWKDIKKKQFAPVYLLLGNESYLINETKQLLLEHALSEDELDFNFAQFDLEETPIE
TALEDAETMPFIGERRLVFLMNPFFLTAEKNKSKVEHNVKKLEQYLADPAPFSIIVLVAP
YEKLDERKKITKELKRKAALFEAKKLSEHDLKTWTRERAAAAQVEMDDAAIEMLLELAGT
NLMMLANEMDKMILYVEEERTIDVETVEKLVGKSLEQNVFTLVDHLLQRNIEQALSIYHE
LLRQNEEPIKILGVIASQVRLMYQVKGLSKQGYSQQKIASALKIHPYRVKLAFQKNGKFD
ERELLAIINDLAEADYKMKTGQIEKAIALELLLMKMR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
ttggtattggatgtttggaaagatataaagaaaaaacagtttgcacctgtttatttgttg
cttggcaatgagagttatttaatcaatgagacgaagcagcttttgcttgagcatgcattg
agtgaagatgagttggattttaattttgctcaatttgatttggaagagactccaattgaa
acggctttggaagatgcggaaacgatgccgtttattggggagagacgtttggtattcttg
atgaatccgttctttttaacagcggagaaaaataagtcaaaagtagagcataacgtaaaa
aaacttgaacaatatttggctgatccagctcctttttccattattgtcttggtcgctcca
tatgaaaagttagatgaacggaaaaaaataacaaaggaattaaaacggaaggcagctctt
tttgaggctaagaagctttcggaacatgacttgaagacgtggactagagaaagagccgct
gcagcacaagttgaaatggatgatgccgcaattgaaatgttacttgagcttgcagggact
aacttaatgatgcttgcaaatgaaatggataagatgattttgtatgtagaagaagaacga
acgattgatgtagaaacggttgaaaagcttgtgggcaaatcgcttgagcagaatgttttt
acgctggtagatcatctcttgcagcgaaatatcgaacaagcattgtctatttatcatgaa
ttgttgcggcagaatgaagagcctattaagattttgggtgttattgctagtcaagtccgt
ttgatgtatcaagtgaagggactttcaaagcaaggctatagtcagcaaaaaattgcctct
gccttgaaaatacatccatatcgagtaaaactagcctttcagaaaaacgggaaatttgat
gaacgtgaattgttagcgatcattaatgatcttgccgaagcggattataagatgaaaacg
ggccaaattgaaaaagctattgcgcttgaattattgttgatgaaaatgagataa
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