Peribacillus psychrosaccharolyticus: I6J18_20490
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Entry
I6J18_20490 CDS
T07206
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ppsr
Peribacillus psychrosaccharolyticus
Brite
KEGG Orthology (KO) [BR:
ppsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsr03019
]
I6J18_20490
03009 Ribosome biogenesis [BR:
ppsr03009
]
I6J18_20490
Enzymes [BR:
ppsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6J18_20490
Messenger RNA biogenesis [BR:
ppsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6J18_20490
Ribosome biogenesis [BR:
ppsr03009
]
Prokaryotic type
rRNA helicases
I6J18_20490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QQS99932
UniProt:
A0A974NLT9
LinkDB
All DBs
Position
4079608..4080921
Genome browser
AA seq
437 aa
AA seq
DB search
MKQNQFDKYELKSYLLEAVNELGFTKPTEIQDRVIPTVLKGTSVIGQSQTGTGKTHSYLL
PIMHKIDPTRQEVQAVIAAPTRELATQIYKEALKIAEHFPEDAPLQIRSYIGGTDKQRMI
DKLKVQPQLVIGTSGRIKDLVEEQALLVYTADMLVIDEADLMLDMGFIEDVDRFASKMAK
DLQMLVFSATIPDKLKPFLKKYMENPKHIQVDPNQATAVKIDHVLIPLRHRDRIQLLHDV
IVKYNPYIGIIFTNTKKMADKVADSLIEKGLRVGRIHGDLTPRERKQMMKQVNNLDFQYI
VATDLAARGIDIEGVSHIINFELPPDLDFYIHRTGRTARAGHSGIAATIYDTPDEDALNK
LEKMGVTFSDVDLVKDEFVKLGDRNKRKKRKKVESVIDEKAKRVGVKPTKVKPGYKKKHQ
REVEDFKKRERRLQRKK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaatcagtttgataaatacgaattaaagagctatttgcttgaagctgtgaac
gagttgggctttacgaaaccaactgaaatacaagaccgtgtaattcctaccgtgttaaaa
ggtacaagtgtcatcggacagtcacaaacaggaacaggcaaaacgcactcttatttgctg
ccgattatgcataaaattgatccaactagacaagaagtacaagctgttattgctgctcct
acacgtgaattagctactcaaatttataaagaagcacttaaaattgcggaacatttcccc
gaggatgcccctttgcagattcgcagctatatcggcggtacagataaacagcgaatgatt
gataaattaaaagtacagcctcagcttgttatcgggacatccggccgaattaaggattta
gtcgaagagcaggcactactggtctatacggcagatatgctggtcatcgatgaagcagat
ttaatgctggacatgggctttattgaagatgttgaccgttttgcttctaaaatggctaaa
gatcttcaaatgcttgttttctctgcaacaattccagataaattgaaaccattccttaaa
aaatacatggaaaatcctaaacatattcaagttgatcctaaccaggcaactgcagtgaaa
attgaccatgttctgattccattgcgccatcgtgaccggattcaattactgcatgatgtt
attgttaaatataatccgtatattggtattatttttaccaatacaaagaaaatggcggat
aaagtagctgattccttgattgaaaagggattacgtgtcggaagaattcacggtgattta
acacctcgtgagcgtaagcaaatgatgaaacaggttaacaatcttgattttcaatatatt
gtagcaacagatttagctgcaaggggtattgatattgaaggtgtaagccatatcattaac
ttcgagcttccgccagatcttgatttctatatccatcgtactggccggactgcccgtgca
ggccattcaggaattgctgctaccatttacgatacaccggatgaagatgcactaaataag
ttagagaaaatgggtgttacgtttagtgacgttgatctagtcaaagatgaattcgtaaaa
ctcggcgatcgtaataagcgtaaaaaacgtaaaaaagttgaaagtgttatcgatgagaag
gcgaaaagagtcggcgtaaaacctacaaaggttaagccaggctataaaaagaaacatcag
cgtgaagtagaagacttcaaaaaacgcgaacgccgtcttcaaagaaagaaatag
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