Planktothrix pseudagardhii: NO713_00299
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Entry
NO713_00299 CDS
T08299
Symbol
mrdA
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ppsu
Planktothrix pseudagardhii
Pathway
ppsu00550
Peptidoglycan biosynthesis
ppsu01100
Metabolic pathways
ppsu01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppsu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NO713_00299 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NO713_00299 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppsu01011
]
NO713_00299 (mrdA)
Enzymes [BR:
ppsu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NO713_00299 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppsu01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NO713_00299 (mrdA)
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Motif
Pfam:
Transpeptidase
PBP_dimer
TnpB_IS66
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
CAD5915187
UniProt:
A0A9W4CEE1
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All DBs
Position
I:372145..373959
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AA seq
604 aa
AA seq
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MANESLFPGQSHYVTIAEQQHPTIRRRRMHQSVAFLLLIGCFFSGLGIQLARLQLIQGEY
HRVRAENNRLRLIPVPAKRGQILDRNGFLLAGSQLSRSVYLWPQEQSPQEWKITAQQLQS
ILKVPASEIREKLEKTGYRSRIPVRVSPNLSPRMFIGLAEKVENLRGVEVRGESRRSYPN
GNLLAHILGYIGEATSEELKANPDYPMGMMVGKMGIEKLANSKIQGVWGNRLIEVDAQGQ
EIQELGLQSPQQGESMRLTVDLALQKTAEKALANRRGAVVVLDVKTGGILALTSGPTFDP
NLFTDQVTSQEWKQLQRAEQPLLNRALQGYPPGSTFKIVTTTAGIESRQFSLTSKLATAS
AINIGGIAFHEHGNGYGVIGFKDALAFSSNTFFYQVGMKTGPENIAKWGKELGLAGTINL
DLLGLDGANHGQIPTPKEKEKLYGEPWYVGDTVTMAIGQGLVLVTPLELAVMISTVANNG
WRVQPHLLMSQTNTSETKPIKTKISASTLNLIRAGLIDVVKKGTGRGLNDGTIPLTGGKT
GTVEIPGQPDNSMYVGFGPANKPEIAIAVVVEAGGFGAVSAAPIAHDIFKTYFSNRNVPT
QSKP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaatccctatttccgggtcaatcccattatgtcacaattgctgaacaacaa
cacccaacgatccgacgtcgccggatgcaccaaagcgttgctttcttattattaatcgga
tgtttttttagcggtttaggaattcaactcgcccggttacaattaattcaaggagaatat
catcgagttcgagccgaaaataatcgcttacgtttgattcctgtgcctgcaaaacgaggt
caaattttagatcgaaacgggtttttattggcaggaagtcaactgtctcgctcggtttat
ttatggccccaagaacaatctcctcaagaatggaaaattaccgcccaacaactgcaatct
attttaaaagttcccgcttctgagattcgggaaaaattagaaaaaaccggttatcgttct
cgaattccggtgcgggttagcccgaatttatccccccgaatgtttattggtttagccgag
aaagtggaaaatttacgcggtgtggaagtgcggggagaatcccgaagaagttatcctaat
ggcaatttattggctcatattttaggttatattggggaagcaacatcggaagaattaaaa
gcaaatcctgattatcccatgggaatgatggttggaaaaatggggattgaaaaattagcc
aattctaaaatccagggagtttggggaaatcgattaattgaagtggatgcgcaaggacag
gaaattcaagagttaggattgcaatctcctcaacaaggagaatctatgcgtttaacggta
gatttagctttacaaaaaaccgccgaaaaagccttagccaatcgtcgaggggcggttgtg
gttttagatgttaaaaccggaggaattttagcattaaccagtgggccgacttttgatccc
aatctgtttactgatcaagtgacttcccaggaatggaaacaactccaacgtgctgaacaa
cctttattaaatcgagccttacagggatatccccccggtagtacctttaaaattgtgacg
acaacggcggggattgaatcacgacaattttcactcacttctaaattagcaactgcttca
gcgattaatattggcgggattgcctttcatgaacatggaaatggttatggggtgattgga
tttaaagatgctttagcttttagtagtaatacctttttctatcaagtgggaatgaaaaca
gggccagaaaatatagcaaaatggggcaaagaattgggactggcgggaacgattaattta
gatttattggggttagatggagcgaatcatgggcaaattcctacccctaaagaaaaggaa
aagttatatggagaaccttggtatgtaggggatacggtaacgatggcaattggtcaaggt
ttagtcttagttacccccttagaattggcggtgatgatttctactgttgctaataatggt
tggcgagttcaaccccatttattaatgtctcaaacaaatacatctgaaaccaaaccgatt
aaaacaaaaatttctgcatccactcttaatctgattcgggctggattaattgatgtggtg
aaaaaaggaacgggacgaggattaaatgatggcacaattcctttaacggggggaaaaacg
ggaacagttgaaatccctggacagccggataattccatgtatgttgggtttgggcctgca
aataaaccggaaattgcgatcgctgtggtggtggaagcgggagggtttggagcagtttct
gcggctccaattgcccatgacatttttaaaacctattttagcaatcgaaacgttccaact
caatctaaaccttag
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