Planktothrix pseudagardhii: NO713_00486
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Entry
NO713_00486 CDS
T08299
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppsu
Planktothrix pseudagardhii
Pathway
ppsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NO713_00486 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsu03400
]
NO713_00486 (xthA)
Enzymes [BR:
ppsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NO713_00486 (xthA)
DNA repair and recombination proteins [BR:
ppsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NO713_00486 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
CAD5918169
UniProt:
A0A9W4CEQ1
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All DBs
Position
I:complement(583791..584594)
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AA seq
267 aa
AA seq
DB search
MKIATWNVNSIRTRKDHIVQWLQTNPVDILCLQETKVIDKDFPRPFFEDLGYEIYIYGQK
AYNGVAILSKIPLDSVYCGFSGLLNTEEAQQFDEQKRVLTGIINGMAIVNLYVPNGSSID
SDKYQYKLNWLNCLKDYLKILLTQTEKICICGDFNIALEDIDIHNPKNRETHIMASDAER
QALQSILELGFQDAFRKFTTEGGQFSWWDYRQASFRRNTGWRIDTHYLTLPLYEVASNSI
IDKIPRTWEQPSDHTPVILTLDLITGA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgcaacctggaatgttaattcaattagaacccgaaaagatcatattgtgcaa
tggttacaaactaaccccgttgacattctgtgtttacaagaaacaaaagtaattgataaa
gatttccctcgtccgttttttgaagatttgggttatgagatttatatttatggccaaaaa
gcttataatggggtggcaattttaagtaaaattcctttggactctgtttattgtggattt
tcaggattgttaaatactgaagaagctcaacaatttgatgaacaaaaacgagttttaacg
ggaattattaatggaatggctattgttaatttatacgttcccaatggttctagtattgat
agcgataaatatcaatataaattaaactggttaaattgtcttaaagattatttaaaaatt
ctgttaactcaaacagaaaagatttgtatttgtggggattttaatattgctttagaagat
attgatattcataaccccaaaaatcgagaaactcatattatggcgagtgatgctgaacgt
caagctttacaatcaatattagaattagggtttcaagacgcctttcgcaagttcacaacc
gaaggcggacagtttagctggtgggactatcgccaagcctccttccgacgcaataccgga
tggcgcattgatacccattatttaaccttacccctctacgaagtcgccagcaattctatc
atcgataaaattcctagaacctgggaacagccgagtgatcacacccctgtcatcttaaca
ctggacttaatcacaggagcatag
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