Planktothrix pseudagardhii: NO713_01173
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Entry
NO713_01173 CDS
T08299
Symbol
ykfD
Name
(GenBank) Putative oligopeptide transport ATP-binding protein YkfD
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
ppsu
Planktothrix pseudagardhii
Pathway
ppsu01501
beta-Lactam resistance
ppsu02010
ABC transporters
ppsu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppsu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NO713_01173 (ykfD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NO713_01173 (ykfD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NO713_01173 (ykfD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsu02000
]
NO713_01173 (ykfD)
Transporters [BR:
ppsu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
NO713_01173 (ykfD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
SMC_N
AAA_29
AAA_16
AAA_5
AIG1
Motif
Other DBs
NCBI-ProteinID:
CAD5929179
UniProt:
A0A9W4G3X0
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All DBs
Position
I:complement(1389999..1391021)
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AA seq
340 aa
AA seq
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MIINSEEKLKSEQKNTFLIRVENLQKYFPVMQGILLQRQVAAIKAVDGVTFDIQRGETLS
LVGESGCGKSTTGRLILQLTRPSDGKIYFENTDLTCLTEKELHPFRRRMQMIFQDPYSSL
NPRMTVGKIISEPLIIHQLANPKTAQNRVKELLELVGLNFDVMNRYPHEFSGGQQQRIGI
ARALAMNPDFIVCDEPIAALDVSIQAQVINLMQNLQKTLGLTYLFIAHDLSVVRHISDRI
AVMYLGKIVEISDRISLYENPLHPYTQALLSAVPIPDPELEAKRQRILLTGEVPSPMNPP
TGCRFCSRCPYVIEQCHIEEPLLKNIGSNHYVACHLVNSN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgataatcaattctgaagagaagctcaaatctgagcaaaaaaatactttcttaattcgg
gttgaaaacttacaaaaatactttcccgtgatgcaaggaattttgctacaacgtcaagtt
gccgccattaaagctgttgatggggttacgtttgatattcaacggggagaaaccttaagt
ttagtcggggagtcggggtgtggaaaaagtacaaccggacgactaattttacaactcact
cgtccgtccgatggaaaaatttactttgaaaataccgatttaacttgtttaaccgagaaa
gaattacatccctttcgccgacgaatgcaaatgatttttcaagatccctattcttcttta
aaccctcgaatgaccgtcggtaaaattattagtgaacctttaatcattcatcaattagca
aatccaaaaacagcacaaaatcgagtcaaagaattattggaattagtcggattaaatttc
gatgtgatgaatcgttatcctcatgaattttccggcggacaacaacaacgcattggcatt
gccagagccttagccatgaatcctgattttattgtttgtgatgaacctattgctgccttg
gatgtttctattcaagcacaagtcattaatttaatgcaaaatttacagaaaactctagga
ttaacttatctgtttattgcccatgatttaagtgtagttcgtcatatttctgaccgaatt
gcggtgatgtatttagggaaaatagtagaaatttcagatcggatttccttgtatgaaaat
ccactccatccctatactcaagctttattatccgccgttcccattccagatcccgaatta
gaagccaaacgacaacgaattttattaaccggggaagttcctagcccgatgaaccctcca
acaggatgccgattttgtagtcgttgtccttatgttattgaacaatgtcacattgaagaa
cctctcttaaaaaatataggttcaaaccattacgttgcttgccatttggtcaactctaat
taa
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