Planktothrix pseudagardhii: NO713_01668
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Entry
NO713_01668 CDS
T08299
Name
(GenBank) putative WD repeat-containing protein alr2800
Organism
ppsu
Planktothrix pseudagardhii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_RIG_2nd
RMC1_N
WD_LRWD1
PROPPIN
Beta-prop_HPS5
Beta-prop_NWD2_C
Ge1_WD40
WD40_like
NB-ARC
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
NACHT
WDR54
AAA_16
Beta-prop_WDR11_1st
Cytochrom_D1
Pentapeptide
nSTAND1
Beta-prop_WDR11_2nd
AAA_22
Beta-prop_LRRK2
Pentapeptide_4
ATPase_2
nSTAND3
DUF3196
AAA
Motif
Other DBs
NCBI-ProteinID:
CAD5937056
UniProt:
A0A9W4G4V2
LinkDB
All DBs
Position
I:1960667..1964383
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AA seq
1238 aa
AA seq
DB search
MNLVASVIMMNFEEALTITDTLVFEKTGKHLNDAQRAVIQGTWYCQKYHEIALEYRCTPE
YLKQDVGPKLWKLLSDELGEKVTKKNFRTVIERRTLEEEGERGSTGAGGAGGAGEAGGVG
ELEGDKGTGRQLEEERLTHRQPSISPHVDWGEATDVSQFYGRIEELAQLQQWILQEECRL
IAVLGMGGIGKTSLSVQLAQKIYPQFEFVIWRSLRNAPPLTEILMDLIQFLAQETELNLS
PDPHRQISQLIDFLRTSRCLIILDNTESILQDGNRVGRYYPGYENYGDLFKRLGETQHQS
CLLLTSREKPREIAALEGQTQKVRSLPLLGLEPENCQEIIQSKGVAGSFEQWQTLIERYA
GNPLALKIVTTTIYDLFGGNVGEFLEQIQQGTAIFGDVRDILEQQLGRISELELETMHWL
AINREPCTVVDLRKDLLSIISPIELIEALESLSRRSLIEKSAGSFTQQPVVMEYMIERLI
EKNLQEIETETINILNQYPLIKSQAKDYIRESQTRLILQPIVQKLLSRYRISGELNQKFK
VLIERLKQHRHSSGYGGGNIINLCHSLDLDLADYDFSQLTIWQAYLQDANLQNVDFSGSD
LSRSVFAKTLGHSLTVALGANGILATGDAEGKIILWTVEDGQQLLVCQGQVGGVKSVTFN
HDGTLLASGSDDESVRLWKVSTGECLNRWREHQGSVNCVCFSPDGDWLASGSNDKTVRVW
DTRSGQCVHHFTDHTDSIRTIAFSPDGDTLASCSEDQTVKLWNLQTGDCLRTFYGHNAWN
WAVTFVRSASIPGKIHAIASSTDEEAVRLWDVNTGHSFHTFHGHQDSVWIVVFSPDGELL
ASSSDDQTVKLWNLRRGTCLKTLPGLESQVCSLAFSPDSQTLATGSVDRMVQLWDVKTGQ
RLRTLRGHRHQVWSFVLSPNGRRLASGSDDDKVRLWDVQTGRCLKQLQGHQDWVWSVAFS
PDGSLIASGSYDRTVKLWDTQTGECLKTLHGHSDRIQAVMFSAEGRLLASASDDQTVKLW
DVQTGELLQTLEGHQRWVGSVAFSPQTSILASGSNDQTIRLWDVETGDCLAVLEGHNDRV
HVLTFASKGSILVSGSYDRSVKCWAVETGECLQTWRGEIERVQGILLTLEGQIWVSGSHD
HDIRLWDIATGNCVKHLEGHSHPVWSVHVDAQGHFLASGSHDQGIKVWDLHTQECLKTLR
ADKPYNGLNITGVTGITTAQKVTLKALGAVDLNPERIL
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggttgcatctgtgatcatgatgaactttgaagaggctctgacaattaccgat
acattggtttttgaaaaaaccggaaaacacctgaatgatgcacaacgagcggtcattcag
ggaacttggtattgtcagaaatatcatgaaattgctttagagtatcgctgtactcctgag
tatctcaagcaggatgtcgggcccaaattatggaaattgttatcggatgagttaggggaa
aaggtcactaaaaaaaattttcgtaccgtcattgaacgccgcacgttggaagaggagggg
gagagggggagtacaggagcagggggagcagggggagcaggggaagcagggggagtaggg
gagttagagggggacaagggcacagggagacaactggaggaggaaagactcacccatcgt
caaccgtcaatatctccccatgtagactggggggaagcaacggatgtgtctcagttttat
ggcagaattgaagaactggctcaactccaacaatggattttacaggaagaatgccgcctc
attgcggtgttaggaatgggaggaattgggaaaacctctttatcggtacagttagctcaa
aaaatctatccccagtttgaatttgtgatttggcgatcgctgcgaaatgcaccgccttta
acagaaattttaatggatttaattcaatttctcgctcaggaaacggagttgaatttgtct
cccgacccccatcggcaaatttcccaattgatcgattttttacgcacttctcgatgttta
attattttagataatacagaatcaattttacaagacggaaatcgagtcggacgctattat
cccggctatgaaaattatggagatttatttaaacgtctgggagaaactcaacatcaaagc
tgtctcctgctcaccagtcgggaaaaacctagagaaattgccgctttagaaggtcaaacc
cagaaagtccggtctttacctttattaggattagaaccggaaaattgtcaagaaattatt
caatctaaaggcgttgcaggttcctttgaacaatggcaaaccttaattgaacgctatgcg
ggaaatcccctcgccttaaaaattgttacaacaacgatttatgatttgtttgggggaaat
gttggtgaatttttagaacaaattcagcaaggaacggcgatttttggcgatgttagagat
atattagaacaacaattaggacgaatttccgaactcgaattagaaaccatgcactggtta
gcgattaatcgagaaccctgtaccgttgttgatttgagaaaagatttattatcgattatt
tctccgattgaattaattgaagccttagaatccttgagtcggcgatcgttgattgaaaaa
agtgctggcagctttacccagcaaccggttgttatggaatatatgattgagcggttaatt
gaaaaaaatctgcaagaaattgaaacggaaaccattaatattttaaatcaatatccttta
attaaatctcaagccaaagattatatccgagaaagtcaaactcggttaattttacagcca
attgttcaaaaactcttaagccgttatcgaatttcaggagaactgaaccaaaagtttaaa
gttctgattgaacggttaaaacaacatcgtcattcttcaggttatggtggcgggaatatt
attaatctttgccatagtttagacttagatttagcggattatgacttttctcaattaacc
atttggcaagcgtatttacaagatgctaatttacaaaatgttgatttttccggttccgat
ttatctcgatctgtgtttgccaaaaccctcggtcattccctcaccgttgctttgggtgct
aacggaattttagctactggagatgccgaaggtaaaattattttatggacagtggaagac
ggtcaacaactgttagtttgtcaaggacaagtcggaggagttaagtctgtcacctttaat
cacgatgggactttactggcgagtgggagtgatgatgaaagtgtgcgactgtggaaagtc
tcaacgggagaatgcttaaaccgttggcgagaacatcaaggaagcgttaactgtgtttgt
tttagtcccgatggggattggttggccagtggtagtaatgacaagaccgtcagggtttgg
gatacccgttctggacagtgtgtgcatcacttcaccgatcacaccgacagcattcgcacc
attgcctttagtcccgatggtgataccttggcgagttgcagtgaggatcaaaccgttaaa
ctctggaatctgcaaacgggagattgtttacgcaccttctatggacataacgcttggaat
tgggccgttacgtttgtgcgttctgcttcaattccgggtaaaattcatgcgatcgccagt
agtaccgatgaagaagccgtccgcctttgggatgtaaatacgggtcacagttttcatacc
tttcacggtcatcaagactcggtgtggatcgtggtatttagtcctgatggagaattatta
gccagtagcagcgatgaccaaaccgtaaaactttggaatctgagaaggggaacttgttta
aaaaccttgcccggattagaaagtcaagtctgctccttagcctttagtcccgatagccaa
accttagcgacggggagtgtggatcgcatggtgcagttatgggatgtgaagacgggacaa
cggttgagaaccttacgcggtcatcgtcatcaggtgtggtcgtttgttctgagtcccaat
ggcagacgtttggccagtggtagtgatgacgataaggtgcgactctgggatgtacagacg
ggtcgctgtctcaaacagttacaaggtcatcaggactgggtatggtcagtcgcatttagt
cccgatggaagtttaatcgccagtggcagttatgaccgcacggtgaaactctgggatact
cagactggggaatgtttgaaaaccttgcatggccatagcgatcgcattcaagcggtaatg
tttagtgctgaaggtaggctattggcgagtgccagtgatgaccaaacggtgaaactttgg
gatgtgcaaacgggtgaactgttacaaaccttagaaggacatcagcgttgggtgggttca
gtcgccttcagtcctcaaacttcaattttagccagtggcagtaatgaccaaaccattcga
ctgtgggatgtggaaacaggcgactgtttggcggttcttgaaggccataatgatcgggtt
catgttctgacttttgcctcgaagggttcgattttagtgagtgggagttatgatcgttcg
gtgaaatgttgggctgtggaaaccggtgaatgtctgcaaacttggcggggtgaaattgaa
cgagtccagggaattttattgactcttgaaggtcagatttgggtcagtggtagtcatgat
catgatattagattatgggatattgcgacgggaaactgtgtaaaacatttagaaggccat
agccatcctgtctggtcagttcatgttgatgctcagggccattttctagccagtggcagt
catgatcaaggaattaaggtttgggatttacacacccaggagtgtttgaaaaccttacgc
gctgataagccttacaatggtttgaatattacgggtgtgacgggaatcactacagcacaa
aaagttacattgaaagcgttaggcgcggtggatcttaacccagaacgaatattataa
DBGET
integrated database retrieval system