Planktothrix pseudagardhii: NO713_01683
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Entry
NO713_01683 CDS
T08299
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ppsu
Planktothrix pseudagardhii
Pathway
ppsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NO713_01683 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsu03019
]
NO713_01683 (recQ)
03400 DNA repair and recombination proteins [BR:
ppsu03400
]
NO713_01683 (recQ)
Enzymes [BR:
ppsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NO713_01683 (recQ)
Messenger RNA biogenesis [BR:
ppsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NO713_01683 (recQ)
DNA repair and recombination proteins [BR:
ppsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NO713_01683 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAD5937298
UniProt:
A0A9W4G4W2
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All DBs
Position
I:1977576..1979030
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AA seq
484 aa
AA seq
DB search
MQASTEWQQVKTAFKKIWGYDDFRPPQGEIIKSLLDYKDALIVMPTGGGKSICFQLPALL
KTGLTLVISPLVALMENQVQELQELKLPAALIHSQLMPQQRRNTLRLVEQNQLRLLYLSP
ETLLSSPVWSVISQPQVQINGLILDEAHCLVQWGDTFRPAYRRLGAIRATLLKLKPTGTK
IAIAAFTATADPDAQAIIKQVLNLKNPQQFLLSPYRSNLELNIKTVCTPRGRQQQLIQFI
QPRKNQTGLIYARTRKDCEQLAQWLQTQNYSTVAYHAGLGSDERRKIEKDWLEENVKFVV
CSSAFGMGINKSNVRWVAHFQAPFLLSEYIQEVGRAGRDGQPAIALTIISEPTGFFYPED
KQRQNYLKENLQKQYQAANQLIKKLPLRGNIETVSEQFNNSEIALSILHAQGRLIWRDPF
HYEIQSKPAKSTLDLNHKAIQQMNQYLKTRQCRWQFLLQAFGFNLDQSFKRCGHCDRCKS
PQKS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatctacagagtggcaacaggtaaaaactgcctttaaaaagatttggggttat
gatgatttccgacctccccaaggggaaattattaaaagcttactagactacaaagatgct
ttaattgttatgccaacgggaggcggaaaatccatctgttttcaacttccagctttatta
aaaaccggattaaccttagtcatctcgcccctggtggcattaatggaaaatcaggtacaa
gaacttcaagagctcaaacttcccgccgccttaattcatagccaattaatgccccaacaa
cgacgtaataccttacgtttagttgaacaaaatcaattaagacttctctatctttctcct
gaaactctattaagttctcctgtttggagtgtgatttctcaaccccaggttcaaatcaat
ggtttaatcttagatgaagcccattgtttagtccaatggggggatacatttcgccctgct
tatcgacgtttaggggctattcgtgcgactttattaaaactaaaacctacgggaacgaaa
atagcgatcgcagcctttacggctaccgccgatcctgatgctcaagctattattaaacag
gttttaaacctcaaaaatcctcaacaatttctcctcagtccctatcgatctaatttagaa
ttaaacattaaaacagtttgtactcccagaggacgacaacaacagttaattcaatttatt
caacctcgaaaaaatcagaccggtttaatttatgcccgtactcgcaaagactgtgaacaa
ttagcccaatggttacaaacccaaaattattcaaccgttgcttatcatgcaggtttaggt
tccgatgaacgccgaaaaatcgaaaaagattggttagaggaaaacgttaaatttgtggtt
tgtagtagtgcctttggcatgggaattaataaaagtaatgttcgatgggttgcccatttt
caagctccgtttttattatcagaatatattcaagaagtggggcgggctggaagagatggt
caacctgcaatcgcattaacaattattagcgaacctacaggttttttctatcctgaagat
aaacaacggcaaaattatttaaaagaaaatctacaaaaacaatatcaagcagccaatcaa
ttaattaagaaacttcccttaagaggaaatatagaaacggtttctgaacaatttaacaat
agtgagatcgccctttccattttacacgcccaaggacgcttaatctggcgtgatccgttt
cactatgaaattcaatctaaacctgctaaatcgactttggatctaaatcataaagccatt
caacaaatgaatcaatacttaaaaactcgtcaatgtcggtggcaatttttattacaagcg
tttggattcaatttagatcagtccttcaaaagatgcggtcattgcgatcgctgtaaatcc
cctcaaaaatcttaa
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