Planktothrix pseudagardhii: NO713_02806
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Entry
NO713_02806 CDS
T08299
Symbol
lgrD
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
ppsu
Planktothrix pseudagardhii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensation
AMP-binding
Thioesterase
TubC_N
PP-binding
AMP-binding_C
Abhydrolase_6
Hydrolase_4
Abhydrolase_1
Abhydrolase_11
Motif
Other DBs
NCBI-ProteinID:
CAD5954744
UniProt:
A0A9W4G7K1
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All DBs
Position
I:3315355..3319608
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AA seq
1417 aa
AA seq
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MNLKQFVAELALAGVKLWVEDDQLRVRAPKKVLTPEVRNLLALHKAELVKLLQNSNAIAN
DTDLPLLRVSRTGNLPLSFAQEGLWFLSQLEPTNPFYNVPLALRLNGSLNVVALEKSLNK
IIQRHEVLRTNFTTVEGQPVQVIALGLTLSVQVIDLSELPESEREIAWGLKARAQIQQPF
DLSSSGLIQASVLKLTPTEHILLLTIHHIVWDAPSEGVLVKELAAFYTAYCNDLLPELPE
LPIQYADFAVWQRQWLQEDILESQLAYWKQQLSGAPEILELPTDRVRKATQTFRGACHRQ
ALSKELTEALMILSQRKGVTLFMTLLAALFTLLYRYTEQTDICVGTPYAGRERRELQGLI
GLFLNTLVLRTDISGNPSFEELLSRVRDVALGAYAHHDLPFEKLLEQLQPARNLSYTPYF
QVRFVLYPAMQIDMEGLTVSPVAVETATAKLDLFVAFVNSDSGLIGTWEYNTDLFDASTI
NRMAQHFQTLLEGIVANPQQKVSELPLLTEPERHQLLVEWNNATKEYPFNKCIHQLFEEQ
VERSPDAIAVVFEGEQLTYQDLNQRANRIAHHLKTLGVEPEVLVGIYVDRSLEMVVSLLG
ILKTGGAYVPLDPSYPKERLAFMLQNSQPKVLLTQECLITELPEHTAQVVCLDTDRHLIA
QHSEENLNQTATVANLAYVIYTSGSTGKPKGVQVTHANLCHYAQAMSQVLNITAEDVYLH
TASIAFSSSVRQLIVPLASGATVKIATSEQRKDPQSLFTTIKQHSVTVIDIVPSYWRNCI
HTLASLEPVTKQALLDNKLRLIVSASEPLLSDLPTQWTFGFQHKARLINMFGQTETCGIV
ATYPIPAQQDEPIKIVPIGRPITNTQIYLLDCHLQPVPVGVPGEVHIGGFGLARGYLNSP
ELTKEKFIPNPFSQEEGTRLYKTGDNARYLPDGNIEFLGRLDRQVKIRGFRIELGEIEAA
LAQHPEVRETVVLARDDQPDNKRLVAYVVPNHEPPATIELRHFLQQKLPDYMVPGAFVML
SSLPLTPNGKVDRRALETPDTELSNSMGFVPPRDTVEQQLQQIWSEVLKLPTVGMKDNFF
TFGGHSLLAVLLMAQISRHFGKNLPIATLFSSPTIEQLASCLRSETHSLPWSPLVAIQSG
TEKRPFFFVPGVGGNVIYLYELARHLGSEQPFYGLQARGLDGESEPFTQLEEIATYYIEA
IQTVQPSGPYLLGGHSFGGVVAFEMATQLLKQGHEVALLAIIDVVAPIVANKPNYSDEDE
VAYLFDFASYIEYMFSLKLEVSKETLASLSQEEQLNYLKERLIRVNLLPPDAGIGLVRGL
VQVYIASLKAHRAYLPSGLQQAPITLFRSSEVDVFEGDTEELKQRRKEPALGWNEFSSTI
DIHVVPGNHSTMMQQPHVQVLATQLLSCLKQTQAPLA
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttaagcaatttgtagctgaactcgccctagctggtgtgaagttgtgggtcgaa
gacgaccagttgcgcgtgcgggcaccaaagaaggtactgacaccagaggtacgtaattta
ttggcattgcataaggcagaacttgtaaagttgctacagaacagcaatgcgatcgccaat
gatactgacctaccccttctaagagtttcgcgaactggtaacttgcctctgtcttttgcc
caagaaggactgtggttcttgagccagttggagccaactaaccccttctacaacgtacca
ctagctctgcgacttaatggttctctcaacgttgtcgctttagagaaaagcctcaacaag
ataattcaacgccacgaggtcttacgcaccaacttcacaacggttgaggggcaacccgtt
caggttattgctcttggcttgaccttgagtgtgcaagtcatagatttgagtgagctacct
gagagtgaaagagaaattgcttgggggctaaaagccagggcacaaatccagcaacccttt
gacctcagtagctctgggttgattcaagcttctgtgctaaagctaacaccgacagaacat
atcttgttactaacaatacatcacattgtctgggatgctccttcagagggcgtattggtc
aaggagttagcagctttctacacagcctactgcaatgacttgctaccagagctaccagag
ctaccgattcagtacgccgactttgctgtttggcagcggcagtggttacaggaagacata
ctagagtctcaacttgcttattggaagcaacaactgtctggtgcgccagaaatattggaa
ctgccaactgaccgagtgcgaaaagcaactcaaacgtttcgaggggcgtgtcaccgacaa
gcactctcaaaagaactaacagaggctttgatgattttaagtcaacgcaaaggagttact
ctgtttatgacgctgttggcggcgctcttcacattgctttaccgttatacagagcagacc
gatatttgcgtaggcacgccttacgcaggccgggagcgccgtgagcttcagggattgatt
ggattgtttctcaatacgttggttctgcggactgatatatcaggtaatccgagttttgag
gagctactctcaagagtccgggacgtggctttgggagcatacgctcatcatgacctaccg
tttgaaaagttattagaacaattgcagccagcgcgtaacttaagctacacaccgtatttc
caagtgaggtttgtgctttacccagcgatgcagatagacatggaaggcttaacggtgagt
ccagtagcggtagaaacagctacggcgaagttggatttgtttgtagctttcgtcaacagc
gactctggactaatcgggacgtgggaatacaatactgacttgtttgatgccagtacgatc
aatcgcatggctcaacattttcagaccttactagagggaattgttgctaatcctcaacag
aaggtttcagaattgccattgctcacagagccagagcgacaccagctattagtagagtgg
aacaacgccacaaaagagtatcccttcaataagtgtatccaccagttatttgaggaacag
gtggagcgatcgcctgatgctattgcggtggtttttgaaggggagcaactgacctaccaa
gatttgaaccaacgggcgaacagaatagcacatcacttgaaaactctaggtgtggagcca
gaagtgctggtgggcatctacgttgatcgctccttagagatggtagtgagtctacttggc
atcctcaaaactggaggggcttatgtgcctttagacccatcctatcccaaagagcgctta
gcgttcatgttgcaaaattcacaaccaaaggtgttgttgactcaggagtgcttgataaca
gaactgcctgaacatacggcacaagttgtttgcttagatacagataggcatctcattgct
caacactcagaagaaaatttaaaccaaacagcaacagttgctaatttagcctatgtcatt
tatacctctggctcaacgggaaagccaaagggagtacaggtgacacacgctaatttgtgt
cactatgcccaagcaatgagtcaagtgctaaatatcacagcagaagatgtatatttgcac
accgcatcgattgctttctcatcttctgtcagacagttgatcgtgcctctggctagtggg
gcaactgtcaaaattgcaacttctgaacagagaaaagacccacaatcactatttacgaca
attaaacaacatagtgtgacagttattgatattgtcccctcttattggcgtaactgcatt
catacacttgctagcttagaacctgttacgaaacaagcactgttagataacaaactgcgt
ttaattgtgtcggcgagcgaaccgctgctgtccgatcttcctactcagtggacgtttggt
tttcagcacaaagcacgattaatcaatatgtttggtcaaactgaaacttgtggaattgtt
gccacttatccaattccggcacaacaggatgagccaatcaaaattgtccctatcggtcgc
ccgatcaccaacacacaaatttatctgctcgactgccatctgcaaccagtccctgttggt
gtacctggggaagtgcatattggtggttttggactggcgcgaggctacctcaacagccca
gaattgacaaaagaaaaattcatccccaacccctttagccaagaagaaggaacacgcctc
tacaaaaccggggacaatgcccgctaccttccagacggtaacattgagttccttggtcgg
ctggatcgtcaagtgaagattcgcggtttccgtattgaactcggagaaatcgaagcagcg
ctagctcaacacccagaggtacgggagacagtagttttagcaagggatgaccaaccagat
aacaaacgactggtagcttatgttgttcccaaccatgaacctcctgccaccattgaactg
cggcacttcctccaacaaaagctcccagactacatggtgccgggagcctttgtgatgctt
tcttctttacctctcacccccaatggtaaggtagaccgtcgcgccttggagacaccagat
acggaattaagtaactcaatgggctttgtccctccccgtgacacagttgaacagcaacta
cagcaaatttggtcagaggttttgaagcttccgactgttggaatgaaggataacttcttt
actttcggaggtcattctcttttagctgtactcttaatggctcaaatttcgcggcatttt
gggaaaaatctgcccatagcaacgcttttctctagcccaactatcgaacagctagctagt
tgtcttcgatccgaaactcattccttgccttggtctcctttggtagcaattcagtctggc
accgagaagcgacctttcttctttgtgcctggagttgggggaaatgtgatttacttatat
gagctagcgcgtcatcttggatctgagcaacccttctacggtctgcaagcacggggactg
gatggcgaatcagagccttttacacagttggaagagatagccacctactatattgaagca
atacagacagttcagccctctggtccgtacctgctgggagggcattcgtttggaggtgta
gttgcctttgagatggcaactcagttgctcaaacaggggcatgaggtcgctctacttgca
attattgacgttgttgcgccaattgttgctaataagccgaattattctgatgaagatgag
gtggcatatctttttgattttgccagctatattgaatatatgttctccctcaagttggag
gtatctaaagaaactcttgcttccctatctcaggaggagcaattgaactatctcaaagaa
cggttgatacgggtcaatttgctaccccctgatgcgggaatagggttagtacgggggcta
gtgcaagtatacattgcgtccctgaaagctcatcgtgcttatttgccttcggggctgcaa
caagctcccattactcttttccgttctagtgaggttgatgtatttgagggtgatacagaa
gagttgaaacaaaggcgaaaagaacctgctttgggctggaacgagttttcttctactata
gacattcatgttgttccagggaaccatagcaccatgatgcaacagccgcacgtacaggtg
ttagccacacaacttctctcttgcctaaagcaaacacaggctccattggcttag
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