Planktothrix pseudagardhii: NO713_04101
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Entry
NO713_04101 CDS
T08299
Symbol
sigB
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ppsu
Planktothrix pseudagardhii
Brite
KEGG Orthology (KO) [BR:
ppsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsu03021
]
NO713_04101 (sigB)
Transcription machinery [BR:
ppsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NO713_04101 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_24
Sigma70_ECF
HTH_Crp_2
HTH_23
HTH_17
HTH_3
HTH_8
Xre-like-HTH
KORA
HTH_AsnC-type
MarR_2
HTH_30
HTH_Tnp_ISL3
Phage_CI_repr
HTH_28
AbiEi_4
HTH_11
HTH_50
Motif
Other DBs
NCBI-ProteinID:
CAD5974966
UniProt:
A0A9W4CQW7
LinkDB
All DBs
Position
I:complement(4752718..4753491)
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AA seq
257 aa
AA seq
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MPTQVINYPRSESLELLRQYQQFPSKDVRNRIVQLNIGLVRKEVHHWVNQCTESYEDLLQ
VGCIGLIRAIERFDLSKGHAFSSFAIPYIRGEIQHYLRDKSPSVRVPRQWLTLQRQSLKV
IQQLHLELKRPPTDAEVAEVLGISVEEWNEVKLANRNRSLLSLDAPIQDEEEGTTCLGEL
VPDSRYRSFQLAQEDQIRLQQALAKLEDGTRKVLEFVFLYDLTQKETAERLGISSVTVSR
RVKKGLSSLQKLMAGGE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcaagtcatcaactatcccagaagcgaaagtttggaactgttacgccaatat
caacagtttccttctaaggatgtccgtaaccggattgtccagttaaatattggattagtg
cgtaaggaggtacatcattgggtaaaccagtgtaccgaaagttatgaagacttacttcag
gtcgggtgcatcggcttgattcgggccatagaaagatttgatttgtctaaaggtcatgcc
tttagttcctttgcaattccctatattcggggtgaaattcaacactacttaagagacaaa
agcccctcggttcgagttccccgtcaatggttgaccctgcaacggcaatccttgaaggtg
attcaacaactccatttagaactcaaacggccccccaccgatgccgaagtcgccgaagta
ttggggatttcggtagaagaatggaacgaagttaaactcgctaaccgcaatcgttcttta
ctgagtttagatgctcccattcaagatgaagaagaagggacaacttgtttaggggaatta
gttcccgatagtcgctatcgtagttttcagttagctcaagaagatcaaattcggttacag
caagctttagctaaattagaagacggaacccgaaaagtgttggaatttgtgttcctctat
gatttaacccaaaaagaaaccgcagaacgtttgggaattagttccgtaacagtttctcgt
cgggtgaaaaaaggcttaagttccttacaaaaactcatggcgggtggcgagtag
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integrated database retrieval system
