Planktothrix pseudagardhii: NO713_04533
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Entry
NO713_04533 CDS
T08299
Symbol
ycf27
Name
(GenBank) putative transcriptional regulator ycf27
KO
K02658
twitching motility two-component system response regulator PilH
Organism
ppsu
Planktothrix pseudagardhii
Pathway
ppsu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NO713_04533 (ycf27)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppsu02044
]
NO713_04533 (ycf27)
02022 Two-component system [BR:
ppsu02022
]
NO713_04533 (ycf27)
02035 Bacterial motility proteins [BR:
ppsu02035
]
NO713_04533 (ycf27)
Secretion system [BR:
ppsu02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
NO713_04533 (ycf27)
Two-component system [BR:
ppsu02022
]
CheA family
ChpA-ChpB/PilGH (chemosensory)
NO713_04533 (ycf27)
Bacterial motility proteins [BR:
ppsu02035
]
Pilus system
Twitching motility proteins
NO713_04533 (ycf27)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
DUF2325
B12-binding
OKR_DC_1_N
UPF0146
Motif
Other DBs
NCBI-ProteinID:
CAD5979484
UniProt:
A0A9W4DCT3
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Position
I:complement(5249505..5249873)
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AA seq
122 aa
AA seq
DB search
MTTVMIVDDSISLREMIADMLRKSGVEVISAGDGMEALEKIEQVKHLDLVVLDIVMPNMN
GYELCRHIKKHPKTQNVPVVMCSSKSEEFDRYWGIKQGADAYISKPFHPQELMSTIKQLL
RK
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtcatgattgtcgatgatagcatctccctccgagagatgattgcagatatg
ttgcgtaaaagtggcgtggaggtaatctcagcgggagatgggatggaagccttagaaaaa
attgaacaagtcaagcatctggatttggtggtgttagatattgtcatgccgaatatgaat
ggctatgaactttgccgccatattaaaaaacaccccaaaacccagaatgtccctgtagta
atgtgttcgagtaaaagcgaggaatttgatcgctattggggaattaaacagggggctgat
gcttatatctcaaaacccttccatccccaagaactcatgagtacaatcaaacaacttcta
cgcaagtaa
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