Planktothrix pseudagardhii: NO713_04976
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Entry
NO713_04976 CDS
T08299
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ppsu
Planktothrix pseudagardhii
Pathway
ppsu03410
Base excision repair
ppsu03430
Mismatch repair
ppsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NO713_04976 (recJ)
03430 Mismatch repair
NO713_04976 (recJ)
03440 Homologous recombination
NO713_04976 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsu03400
]
NO713_04976 (recJ)
DNA repair and recombination proteins [BR:
ppsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NO713_04976 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NO713_04976 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NO713_04976 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
CAD5982350
UniProt:
A0A9W4CRS7
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All DBs
Position
I:complement(5726944..5729325)
Genome browser
AA seq
793 aa
AA seq
DB search
MWQIQPTLDVPEWVIPIIQEYAPQSSGKYIAQLLLRRRIQTPQQLVGFLNPQCYQSASPF
EFGIEMERAVERLVLARNNQEIVTIWGDFDADGITATSVLWDGLGQFFNRENQQLSYYIP
NRLIESHGLNCTGIDQLYQQGCRLIVTCDTGSTNLKEIEYANQLGIDIIVTDHHTLLEER
PPVIAIINPRYLSPDHPLYHLSGVAVAYKLVEALYEILPNIPQRPLEDLLDLVAIGLIAD
LVQLKGDCRYLAQLGIEKLQQQLKNPTRPGVAKLLELCKRTGDRPTDISFGLGPRINAVS
RIYGDAKFCVELLTSRDKKRCQQLALETELANTRRKALQQDVTRDVMAKLRKIDLSTTQV
IVLSDAQWPGGVLGLVAGQVAQNYGRPTILLTTEGTINLSGYGDQLSQNSEFKLARGSAR
SVNQIDLYELVKSQSHLLHRFGGHPLAAGLSLPVENIPIFTDAINRQMREQVESDLEEIG
QRNIQVDLVCTVAELGVDLFQELKLLEPCGMGNPVPKLLIQNCWFTNAWHSLEQDVRGRK
VQYIKTTFELWDESTTTGFPGVWWGHYKDELPEGRSDVLVELDFNTFKKQYEIRVLELYS
AENQALISSINFADHPILDYRNQPLDERLSNSEGSQNPLILKDCPTCWEDLQAWFRRAYT
QKKPLAIAYTLPELLPPVKIWEQLIGIAKYLSRTHQAVTHQQLRHQLNLGGIPLKIGFEA
LKLLGFKIEYRDHSCYITRQDLSPLNASPTLPQLIQTFLIAVQEEQFRREYFCNVPVSTL
EYFAIQTMKNIGV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaaattcaaccaactttagatgttcctgaatgggtaattcctattattcaagag
tatgcacctcaaagttcaggaaaatatattgctcaattattgcttcgccgaagaatacaa
acccctcaacaattagttggatttttaaatcctcaatgttatcaatctgcaagtcccttt
gagtttggaattgagatggaaagggccgttgaacgattagttttagcgcgaaataaccaa
gaaattgtaaccatttggggagattttgatgctgatgggattactgcaacttctgtgtta
tgggatggattaggacaattttttaatcgtgaaaaccagcaactatcttattatatccct
aatcgattaatagaatctcatggattaaattgtactggaattgatcaattatatcaacaa
ggatgtcggttaattgttacctgtgacacgggaagcaccaacttaaaagaaattgaatat
gctaatcaattaggaattgatattattgtaacggatcatcatactttgctcgaagaaaga
ccgcctgttattgcgattattaatccccgttatttatctccagatcatcctttatatcat
ttatcaggcgttgccgttgcttataaattagtcgaggcattatatgaaattttacccaat
attcctcaacgtcccttagaagatttattagatttagttgcgattggtttaattgctgac
ttagttcaactcaaaggagattgtcgttatttagctcaattaggaattgaaaaattacaa
caacaattaaaaaatccaacccgtccaggggtcgctaaactgttagaactctgtaaacga
acaggcgatcgcccgacggatatttccttcggtcttggccctagaattaatgccgtgagt
cgcatttatggcgatgctaaattctgtgttgaactcctcaccagccgagataaaaaacgc
tgtcaacaactcgctttagaaaccgaattagccaatactcgccgtaaagcattacaacaa
gatgtgacccgtgatgttatggcaaaattaagaaaaatagatttatcaactactcaagtt
attgtgttatccgatgctcaatggccgggaggagttttaggtttagtggcgggtcaagtc
gctcaaaattatggacgaccgacgattttattaaccaccgaaggaacaattaatttatcc
ggttatggagatcaattaagtcagaattcagagtttaaattagctagaggttctgctcgt
tcagtaaatcaaattgatctctatgaattagttaaaagtcaatcccatcttttacatcga
tttgggggtcatcccttagccgctgggttaagtttacccgtagaaaatatacctattttt
accgatgctattaatcgccaaatgcgagaacaagttgaatcggatttagaagaaattgga
caacggaatattcaagttgatttagtttgcaccgttgccgaattaggggttgatttattt
caagaattaaaactattagaaccttgtggaatgggaaacccagttccgaaacttttaatt
caaaattgttggtttacaaatgcttggcattctttagaacaagatgttagaggacgaaaa
gttcaatatattaaaaccacttttgaactgtgggatgagtccaccacaacgggatttccg
ggggtttggtggggacattataaagatgaattgccagagggacgttcagatgttttagtt
gaactggattttaatacctttaaaaaacaatatgaaattcgcgtattagaattatattct
gctgaaaatcaagctctgatctcatcgattaattttgctgatcacccgattttagattat
cgaaatcaacccctagatgaacgtttatctaattcggaaggaagtcaaaatccattaatt
ctcaaagattgtccaacgtgttgggaagacttacaagcttggtttcgacgcgcctatact
caaaaaaaacccttagcgatcgcttataccttacctgaattattacctcctgtcaaaatt
tgggaacaactcattggaattgcaaaatatcttagtcgtacccatcaagccgtcacccat
caacaactgcgccatcaattaaacctcggaggaatccccttaaaaataggttttgaagcc
ttaaaactcctaggatttaaaattgaatatcgggatcattcctgttatataactcgacag
gatttatcacccttgaatgcttccccaactcttccccaattaatccaaacctttttaatt
gctgttcaagaagaacagtttcggcgcgaatatttttgtaatgttcctgtttcaacccta
gaatattttgctattcaaaccatgaaaaatataggagtttaa
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