Planktothrix pseudagardhii: NO713_05240
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Entry
NO713_05240 CDS
T08299
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA homolog
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ppsu
Planktothrix pseudagardhii
Brite
KEGG Orthology (KO) [BR:
ppsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ppsu03110
]
NO713_05240 (clpC)
Chaperones and folding catalysts [BR:
ppsu03110
]
Heat shock proteins
HSP100
NO713_05240 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
TniB
NBD_SMAX1
UVR
AAA_18
Zeta_toxin
Mg_chelatase
AAA_28
IstB_IS21
TsaE
ATPase_2
Torsin
VapE-like_dom
NACHT
ResIII
AAA_23
DNA_pol3_delta2
TIP49
Motif
Other DBs
NCBI-ProteinID:
CAD5984020
UniProt:
A0A9W4CSE0
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Position
I:complement(6024888..6027362)
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AA seq
824 aa
AA seq
DB search
MFEYFSDKAIKAVMLSQEEARRLGHNFVGTEQLLVGLISEGSNVAAKILVAQGLVLRDVQ
KEVEAMIGRGSGFVPVEIPFTPRAKRIFEMAMKEARQMGNNYIGPEHLLLGLLQDNEGVA
AKVLENLGVDRSQLRTEVIKALGEETTVSAAGSGRRGSAKTATLDEFGTNLTQLAAEGKL
DPMIGREREIERVIQILGRRTKNNPVLVGEPGVGKTAIAEGLAQRIVNNDVPDVLENKQV
ISLSMGTLVAGTRFRGEFEERLKTIVEEIRTAGNIILVIDELHTMVGAGAIEGTMDASNM
LKPALARGELQCLGATTLDEYRKYIERDAALERRFQPVMVGEPSVEETVEILFGLRRAYE
QHHQLTISDQALYAAATLSDRYISDRFLPDKAIDLIDEAGSRVRVMNSKVPPELRELKRE
LTKVIAEKETAVKLQDFDKASQLRDRELEIKDKLETPSEKVNSASGSLIVTEEDIADVLA
AWTGIPVNKLTESESVKLLKLEDILHQRLIGQHEAVNAVSRAIRRARVGLKNPNRPIASF
IFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGFVGYDEGGQ
LTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDAKGRVVSFKNTLIIMTSNVG
SKVIEKGGGGLGFEWSASEEDQQYNRIRNLVNEELKQYFRPEFLNRLDEIIVFRQLQKSE
VKEIADILLRELLARLTEREITLTVSERFKEHLVNVGFDPKYGARPLRRAIMNLLEDVLA
EALLAGTLKDGDSALVDLDADGKVIILPGEQALNSMSEYAITHS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatatttttctgataaagcaattaaggcggtgatgttatctcaggaagaagcg
cgacgcctgggacataactttgtgggaaccgaacaactgttagtcggtttaattagcgaa
ggcagcaatgtagccgctaaaatactggtagcccaagggttagtcctgcgcgacgtacag
aaagaagttgaagccatgattggtcggggatcaggttttgtcccggttgaaattcccttt
acccctagggcgaaacgcatctttgaaatggcgatgaaagaagctcgccaaatggggaat
aactatattggcccagaacatctgttattaggattattgcaggataacgaaggcgttgcc
gccaaagtcctagaaaatctgggcgttgaccgttctcaactgcgtaccgaagttattaaa
gctttaggggaggaaacaacggtttccgccgcaggaagcggtcgtcggggttctgctaaa
acagccaccttagatgaatttggcacgaacttaacacaattagccgccgaaggtaaactc
gatccaatgatcggtcgggaacgggaaattgagcgggtgatccaaattctcggtcggcgg
acgaaaaataaccctgtgttagttggggaacccggcgttgggaaaacagccattgcggaa
ggcttggctcaacgcattgtcaataatgatgttcccgatgtgctggaaaataaacaagtg
atcagcttgagcatgggaaccttagtggcgggaacccgtttccggggtgaatttgaagaa
cggctaaaaaccattgttgaagaaattcgcaccgccggaaatattattttagtcatcgat
gaacttcatacaatggtgggtgcaggggccattgaaggcacaatggatgcgtccaatatg
ctgaaaccagctttagcgcggggtgagttgcaatgtttgggggcgacgaccctggatgaa
tatcgcaaatatattgaacgggatgcagccttagaacgtcggtttcaaccggtgatggtg
ggtgaaccctctgttgaagaaaccgttgaaattttgtttgggttgcgtcgtgcctatgaa
caacaccatcaattaaccatttctgatcaagccttgtatgccgccgcgactttatccgac
cgctatattagcgatcgctttttacccgataaagccattgatttaattgatgaagcgggt
tcacgagttcgggtgatgaattctaaagttccccctgaattgcgggaattaaaacgggaa
ttaacgaaagttattgcagaaaaagaaacggcggtgaagctgcaagatttcgataaagcc
agccaattgcgcgatcgcgaattagaaattaaagacaaactggaaacccccagtgaaaaa
gtcaattctgcttctgggtctttaattgttaccgaagaagatatcgccgatgtgttagcg
gcttggacaggaattccagtcaataaattaacggaatctgaatcggttaaattattgaag
ttggaagatattttacatcaacgattaattggtcaacatgaagccgtcaatgccgtttct
cgcgccattcgtcgggctcgtgtggggttaaaaaatcccaatcgacccattgccagtttc
attttttctggccctacaggagtcggaaaaacggaattaacaaaagccttagctgcctat
ttctttgggtcagaagaagcgatgattcgtttagatatgtcggaatatatggaacgacat
acggtatctaaattaatcggttctcccccagggtttgtcggttatgatgaaggcggacaa
ttaaccgaagcggtgcgtcgtcgtccctatacggtggtgttatttgatgaaattgaaaaa
gcccacccggatgtcttcaatttgttattacaaatcttagaagatggacgattaaccgat
gctaaaggtcgcgttgtcagtttcaaaaacaccttaattatcatgacctctaacgtcggg
tctaaggtgattgaaaaaggcggcggcggtttaggatttgagtggtcagcttcggaagaa
gatcaacaatataaccgcattcgtaacttagtcaatgaggaactgaaacaatatttccgt
cctgaattcctcaaccgtttggatgaaattattgtcttccgtcaattacagaaatctgaa
gttaaggaaattgcagatatcttattgcgagaactcttagctcggttaactgaacgggag
attaccttaacggtgagtgaacggtttaaggaacatttagttaatgttggttttgatccc
aagtatggcgcaagaccgttacgtcgggcgattatgaatctgttagaagatgttttagca
gaagcattattagccggaacccttaaagatggggatagcgccttggttgacttagatgct
gacgggaaagttattattttacccggagaacaagccctaaattcaatgagtgaatacgct
attactcactcataa
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