KEGG   Persicobacter psychrovividus: PEPS_02200
Entry
PEPS_02200        CDS       T09740                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ppsv  Persicobacter psychrovividus
Pathway
ppsv00061  Fatty acid biosynthesis
ppsv00071  Fatty acid degradation
ppsv01100  Metabolic pathways
ppsv01212  Fatty acid metabolism
ppsv02024  Quorum sensing
ppsv04146  Peroxisome
Module
ppsv_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ppsv00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    PEPS_02200
   00071 Fatty acid degradation
    PEPS_02200
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    PEPS_02200
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PEPS_02200
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ppsv01004]
    PEPS_02200
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppsv04147]
    PEPS_02200
Enzymes [BR:ppsv01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     PEPS_02200
Lipid biosynthesis proteins [BR:ppsv01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   PEPS_02200
Exosome [BR:ppsv04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   PEPS_02200
  Exosomal proteins of breast cancer cells
   PEPS_02200
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: BDC97939
LinkDB
Position
complement(252278..254119)
AA seq 613 aa
MEMLTILDLFEKAVHAHAEQPLFWQWQQGVYSPISYQQVSEQVHQQANGWQHFGLEAGQK
VALWLESAPIWAITELSIWYAGGVVVPINLKISTDTLLWQIHHAECSHLIIERHQLPLIL
AHKSALPEGLTIWINEETEKNEQENIHSLNELVHFGRQVPMMPTQKIANLIFTSGTMSDP
RAVILTHHNIRTNIIQIQQTIPIPTRARTFMLLPMDHAFAHTVGLYCVIAQGGSIGFPPT
GKSMMEMLRMIPEILQSFEPDFLLMVPALIKSLKAYIERGVRAMGEEFEQEYRKALTLAY
RKNRMGNKFGFRHKVRAMMLKHAVLRKIKEKLFPNMKFMVSGGAHLNPNVISYFSAFGLP
VYQGYGLTEAAPVVATNNRNHHKIGSVGRPLPNIRLMITNEAGEELPADQMGEILVNGEN
VTEGYFNNPKATADTIQGKWLHTGDLGKIDQEGYLHVMGRFKSLLISADGEKYPPEIIET
ELEEKCPYIDSVCIYNNQSRFTLALIVPNMRQIQAALKAIPKNQHTTTALRLIEDELKQF
RKESPIAAKWTPVRFRILDEAFSLQNGELNHNFKMVRPKIHQHYERDIETIYRKNWQNLD
DPNNLEKMTLLLK
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggaaatgctcaccattttggacctattcgaaaaagcggtacacgcccatgccgagcag
ccgctattttggcagtggcagcagggggtttacagccccatttcttaccagcaggtgagc
gaacaggtgcatcagcaagccaacggctggcagcattttggtttggaagcggggcaaaaa
gtagccctgtggcttgaatcagcgccaatttgggccatcacggaactgtctatttggtat
gcaggtggggtagtggtacctatcaatctgaagattagcaccgacaccctcctttggcaa
atccaccatgcggaatgcagccacctgatcatcgagcggcatcagctcccccttattctt
gcgcacaaatccgcactccccgaggggctcaccatctggataaatgaggagaccgaaaaa
aatgaacaagaaaatattcattcgctcaatgagctcgtccattttggtcgtcaggtaccg
atgatgcccacccagaaaatcgccaatctgattttcacctccggcaccatgtcagacccc
cgcgcggtaatcctgacccaccataacatccgcacaaatattattcagattcagcaaacc
attcccatccctacaagagcgcggactttcatgctcctaccgatggatcatgcctttgcg
cataccgtaggcctgtattgcgtgatcgcacaaggagggagcattggctttccgcctact
gggaaatcgatgatggaaatgctgcgcatgatcccggagattttgcagtcttttgagcca
gatttcttactgatggttcctgccctgatcaaaagcctgaaagcctatattgagcgtggc
gttcgggcaatgggcgaggaatttgaacaggagtaccgcaaggcactaacgctggcttac
cgaaaaaaccgcatgggcaacaaatttggctttcggcacaaggtacgcgccatgatgctc
aagcatgctgttttacggaaaatcaaagaaaagctctttccaaatatgaaattcatggtt
tctggtggagcgcacctcaaccccaacgtcatttcctatttcagtgcttttggcctgcct
gtttatcaagggtacggacttaccgaggcggctcccgtagttgcgaccaacaaccgtaac
caccataaaataggctcggtagggcgcccgctgccaaatatacgcctcatgattaccaac
gaagcgggggaggaattacctgccgatcaaatgggggagattctcgtaaatggggaaaat
gtgaccgaagggtatttcaataaccccaaagcaaccgccgacaccattcagggtaaatgg
ctgcatacgggcgacctgggcaagatcgaccaagagggctacctgcatgttatgggaaga
tttaaaagcctgttgatctctgcagacggcgagaaataccctccagaaattattgaaaca
gaactggaagaaaaatgcccatacattgacagtgtttgcatttataacaaccagtcgagg
tttacccttgccctgattgtccccaatatgcggcaaattcaagcggcgctgaaagccatc
ccaaaaaatcagcataccacaacagccctgcggcttattgaagacgaactgaaacagttc
agaaaggaaagtccgattgcggcaaaatggacacccgtgcgcttcagaatcctcgacgaa
gccttcagcctgcaaaatggagagctgaatcacaattttaaaatggttcgcccaaagatt
catcagcactacgaaagggacattgaaaccatttacagaaaaaactggcaaaacctcgac
gacccaaacaatttggagaaaatgacgcttttactaaaataa

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