Persicobacter psychrovividus: PEPS_03590
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Entry
PEPS_03590 CDS
T09740
Name
(GenBank) lytic transglycosylase F
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
ppsv
Persicobacter psychrovividus
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppsv01011
]
PEPS_03590
Enzymes [BR:
ppsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PEPS_03590
Peptidoglycan biosynthesis and degradation proteins [BR:
ppsv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PEPS_03590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
BDC98078
LinkDB
All DBs
Position
405046..406584
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AA seq
512 aa
AA seq
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MKRDRLFVSIRKQNYMNIAHYINSSFNRGARFLYAAVMLSLIPTACRQTSTNTIKAEVLE
HQLVTHTPMVEIDLKEIKDRGYLTAILYGNRSSYYLYKGTPRGYEYELLQSLSKSLDVDL
KVKMTDSFASAMKLLNAGEGDVIAHNLSQTNRRKLLVNFTDALREEAPALVQRKVGRKNP
VSPEQPTEFLVKRVELANKTVYVAKNTVYANMLHRLSLICKAPVDVQVVDKSTDELIREV
AEGLIDYTIADQYIANSKAVYFGNLDTEMAIDEAQPLSWAVRKNSPELLAATNDWLTQIK
RTFRFNGIYNRYFMDEKRLKLRNDSEFSSLNGARLSPYDELIREGAENIRWDWRLLAAQI
YQESLFNPHAKSWMGAEGLMQVMPNTAKFFGKDSEKLYDPHHNIEAGTEYLNWLNKFWAK
RVENPEERIKFILASYNAGQGHVLDAQRLAEKYGKDTKTWDDNVEVFMLKKSEAEYYKDP
VVKSGYCRGREPVAYVKNIMSRYESYQQLIPS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagatcgtttatttgtgagtattcgaaagcaaaattatatgaatattgcccat
tacatcaatagttcttttaatcgcggtgcccgatttctttacgcagcagtaatgctgagt
ttgattcctacggcttgtcggcagacgtccaccaacacgatcaaggcagaagtgctcgaa
catcagttggtaacgcatactccgatggtggaaatcgatctgaaagagatcaaagaccga
ggatacctgacggcaattctttatgggaaccgttcaagttactacctgtataaaggaaca
ccacgaggttatgagtatgaattgttacagagcctttccaaatcccttgatgtggacctg
aaggtgaaaatgacagattcatttgcttcggcaatgaaattgctgaacgcaggagaagga
gatgtcattgctcataatctttcccagaccaaccgtcgcaaacttctggttaattttaca
gatgccctgcgtgaagaagcacctgctttggtgcagcgtaaagtgggtagaaaaaatcct
gtgagtccagagcagcctaccgaatttttggtgaagcgagtggagctggccaacaaaacg
gtttatgtggcaaaaaatactgtttatgcgaatatgctgcatcggttgtcgctgatctgt
aaagctcctgtggatgttcaggtcgtggataagtctactgatgaactgatccgcgaggtt
gccgaggggttaatcgattataccattgcagatcaatatatcgccaattccaaagccgtt
tattttggtaatttggatacggagatggcgattgatgaagcacaacctttatcctgggcg
gtgcgaaaaaattcccctgagctattggccgctaccaacgactggctgacgcaaatcaaa
cgtaccttccgtttcaatggtatttataatcggtacttcatggatgagaaacgcctgaag
ttgcgtaatgattcggagttctcatcactgaatggtgcccgcctgagcccttatgacgaa
ctgattcgtgaaggggcggaaaatatccgatgggattggcgcctgctggcagctcagatt
tatcaggagtcgctctttaacccacatgcaaaatcgtggatgggtgccgaagggctgatg
caggtcatgccaaatacggccaaattctttgggaaggattcagaaaaactttatgatcct
caccataatattgaagcgggaacagaatacctgaattggcttaataaattttgggcaaaa
cgggtagagaatcctgaagagcgaattaagtttattctggcaagttataatgctgggcag
ggccatgttttggatgcgcagcgattagcagagaaatatggtaaggataccaaaacatgg
gatgataatgtggaggttttcatgctgaagaagtctgaagcggaatactacaaagaccct
gtggtgaagtcgggttattgccgaggtcgtgagcctgttgcttatgtgaagaatatcatg
agccgttatgaatcttaccagcagttaattccaagctaa
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