Persicobacter psychrovividus: PEPS_05680
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Entry
PEPS_05680 CDS
T09740
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ppsv
Persicobacter psychrovividus
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsv03009
]
PEPS_05680
Enzymes [BR:
ppsv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PEPS_05680
Ribosome biogenesis [BR:
ppsv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PEPS_05680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
TRAM
TRM5-TYW2_MTfase
Methyltransf_25
MTS
Cons_hypoth95
PrmA
PCMT
N6_N4_Mtase
UPF0020
DOT1
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
BDC98287
LinkDB
All DBs
Position
660653..662059
Genome browser
AA seq
468 aa
AA seq
DB search
MGRKKIKDIKGLRIEKFAAEGNCLGYAEDGKVIFVSHSAPGDLMDVRVVKQRRKFIQAAP
EQVYEFSDMRQEPHCEHFGLCGGCKWQHLKYEHQLEFKTQVVRETMEHLAKIEIPEIPQA
VGSEKTEFYRNKMEYSFTNFRWLTKEEISQEEAHNRNGLGLHVPGGFDKIIHVNKCWLQP
DPSNQIRTAIHEFALANEIPFYNVKFAEGHLRNVTIRTANTTGQVMVILQVFTDEQKWTL
PLVQHLQDTFPQITSLFYVVNKKGNETIFDQELVLHHGKPYIEETMEDLTYRVGPKSFYQ
TNSEQAFTLYSITRDFADLKGDEVVYDLYTGTGTIANFIAKKAKQVIGIEYVDAAIEDAK
INAEINNIENTLFYAGDMKKVLNDKFIAKHAAPDVIVTDPPRAGMDKEVIDMLLKLEAKR
IVYVSCNPATQARDLDLLDVKYKVTKIQPVDMFPHTHHIENVVALELK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaaaaaaattaaagatattaaggggcttcgcattgagaagtttgccgctgag
gggaattgtttgggctatgcagaagatggcaaagtgatctttgtatcgcattcggcacca
ggcgatttaatggatgttcgcgtggtaaaacaacgccgtaaatttattcaggcagcaccc
gagcaggtttatgagttctcggatatgcgtcaggagccacattgtgagcatttcggtttg
tgtggtggctgtaagtggcaacacctgaaatatgagcatcagttggagtttaaaacgcag
gtggttcgtgaaaccatggagcatttggcgaagattgaaattcctgagattcctcaggcg
gtgggctctgagaaaacagaattttaccgcaacaagatggaatattccttcacgaatttc
cgttggctgacaaaagaagaaatttcgcaggaggaagcccacaaccgtaatggtttggga
ttgcatgttcctggtggtttcgacaagattattcatgtcaataaatgctggttgcagcca
gacccttcaaatcagattcgtactgcaattcatgagtttgcacttgcaaatgaaattccg
ttttacaatgtgaaatttgcggaagggcacctgaggaacgtaacgatccgtacggccaat
actactgggcaggtgatggtgattttacaggtgttcaccgatgaacaaaagtggacttta
ccattggtgcagcatcttcaggatactttcccacagatcacttctttgttttatgtggtg
aataaaaaaggcaacgaaacgatcttcgatcaggaattggtgcttcatcatggtaagcca
tatattgaagaaaccatggaagacctgacttaccgtgtagggccaaagtctttctatcaa
accaactcagagcaggcctttacgctgtattctatcacgcgtgattttgctgaccttaaa
ggggacgaagtggtttatgacctttacacagggacaggaactattgccaactttattgct
aaaaaagccaaacaggttattggtattgagtatgtggatgcggcaattgaggatgccaag
atcaatgcagagatcaataatatagagaataccctgttctatgctggcgatatgaaaaaa
gtgcttaacgacaagtttattgccaagcatgctgcgccagatgttattgtaactgatccg
cctcgtgcaggaatggataaggaggttattgatatgttgttgaaacttgaagccaaacgc
atagtgtatgtaagctgtaacccggcaacgcaggcacgcgatttggacctgttggatgtg
aagtataaagtgactaaaattcaaccagtggacatgttccctcacacacatcacatcgag
aatgtggtggctttggagttgaaataa
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