KEGG   Persicobacter psychrovividus: PEPS_08260
Entry
PEPS_08260        CDS       T09740                                 
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
ppsv  Persicobacter psychrovividus
Pathway
ppsv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PEPS_08260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppsv03400]
    PEPS_08260
Enzymes [BR:ppsv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     PEPS_08260
DNA repair and recombination proteins [BR:ppsv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     PEPS_08260
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PEPS_08260
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PEPS_08260
SSDB
Motif
Pfam: RNase_T Exonuc_X-T_C RNase_H_2 MetOD1 CCDC-167
Other DBs
NCBI-ProteinID: BDC98545
LinkDB
Position
complement(956704..958128)
AA seq 474 aa
MRTFLFYDLETSGLHHAFDQVLQFGAIRTNEQLEEIERHEFRIKIRPDVIPSPEALTTTK
VNPELLHQGTYNEYEAMKVIHALINTPETTSIGYNSIGFDDLMLRHAFYRNLFDPYTHGY
SNKCSRADLLPVAIIYRQFAPEGIQWPVTEEGKPSMKLELISKLNALASGNAHDAMVDVE
ATLALARKMKQNATIWSWAMGYFDKNNYNSRLEKYLEAKKLGEQLTIQWGLLVDNKLGGL
NGYQAPVLYLGFTGMKQHLYLQLDRTDLEAADQEGTLNELNCVWRGKAGEPPFILPFDKL
QSEYITEERRALMSKNIQWIKNNPQSFEQLRQFQIDFRYAEVQNVDEDDRIYQGFWESKV
KNMNLSFHQAKDWNEKYDIAGLYPNETVRTLARRILFRNEERLSPELGAQQMEFITERWA
DEDIIDKTGRPRLTAQKALERTEELLQEEDLADDNRQILEEYMEWLHERLANFY
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgcgtacatttcttttttacgatttagaaacctcaggacttcatcatgccttcgatcag
gtattgcaatttggcgccattcgaaccaatgaacagctcgaggaaattgaacgccacgag
ttccgcatcaaaatacgcccagatgtgatcccttcacctgaagcgctgaccaccaccaag
gtgaaccccgagttgctacatcaaggaacgtacaatgagtatgaggccatgaaggtgatc
catgcgctcatcaataccccagaaaccacctccatcggttacaattctattggttttgac
gacctgatgcttcgccatgcattttaccgcaacctcttcgacccttatacccacgggtac
agcaacaaatgcagccgagcggatttattgcccgtagcgattatctaccgacaatttgct
cctgaaggcattcagtggcccgttaccgaggaaggcaaaccgagcatgaagctggagctg
atctcaaaattgaatgctttggcttctggcaatgcccatgacgccatggtggatgtcgag
gccacactggcactcgcacgaaaaatgaaacagaatgccaccatctggagctgggccatg
ggctatttcgataaaaacaattacaatagccgactcgaaaaatacctcgaagccaaaaag
cttggggaacaactgactattcagtggggattgctggtggacaataaacttggcggactg
aacggctaccaggcacccgtgctttacctcggatttacgggcatgaaacaacacctgtac
cttcagcttgaccgcacagacttggaggctgctgatcaggaagggacgcttaacgaactc
aattgcgtgtggagaggcaaggctggagagccgccatttatccttccttttgataaatta
caaagcgaatatattactgaggaacgtagagcactgatgtcaaaaaatatacagtggata
aaaaataatcctcagtcatttgagcaacttcgccaatttcagattgatttcagatatgcc
gaagtacaaaatgtagatgaggatgatcgcatctatcaggggttttgggagagcaaggta
aaaaacatgaacctgtcctttcaccaagccaaagactggaatgaaaagtatgatattgcg
ggcctttaccccaatgaaactgtccgaacgcttgcccgcagaattctgttcagaaatgaa
gaacgcctgagccctgaacttggcgcccagcaaatggaatttattacggaaagatgggcc
gacgaagacattatcgataaaacaggcagaccccgtttaacggctcaaaaagcccttgag
cgcacggaagaactccttcaggaagaagatttagccgacgataatcgacagattttagag
gaatatatggaatggctgcacgaaagactggccaatttctattaa

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