Persicobacter psychrovividus: PEPS_11560
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Entry
PEPS_11560 CDS
T09740
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ppsv
Persicobacter psychrovividus
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsv03009
]
PEPS_11560
Enzymes [BR:
ppsv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
PEPS_11560
Ribosome biogenesis [BR:
ppsv03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PEPS_11560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BDC98875
LinkDB
All DBs
Position
complement(1374100..1374780)
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AA seq
226 aa
AA seq
DB search
MRLDKFICKCTDLTITEVSLIIAEGKIQVNGEKITEPHHQVHASNQVVFDQKVLTPRPFR
YYMIHKPADTICSNKDEHYPAVFSLTNIPDTDQLHLVGRLDADTTGLLIATDDGHWSFNI
MQPAGKVPKTYQVQLHRPITKEAIEQLEKGVMLQGEKQPTAPAQIEMINEKQVLLTITEG
KFHQVKRMFFAVKNKVTALHRCKIGGLSLDIPEGAWREINKKEVEQ
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcgactggataaattcatatgtaaatgtacagacctgaccattaccgaagtgtcgctg
attattgcggaaggaaaaattcaggtgaatggcgaaaaaatcacagagccccaccatcag
gttcatgcttccaatcaggttgtttttgaccaaaaagtcctgacccctcgcccattccgg
tactatatgatccataaacccgccgacaccatatgctccaataaagacgagcactaccct
gctgttttttcactaaccaatatccccgacaccgatcaactgcacctcgtaggccgactc
gatgccgacaccacaggactactcattgccaccgatgatgggcattggtcctttaatatc
atgcaacctgcgggcaaggttcctaaaacctatcaagttcaactccatcgaccaataacc
aaagaagccattgaacagcttgaaaaaggggtaatgttgcaaggggaaaaacagcctacg
gcccctgcacaaatagaaatgatcaatgaaaaacaggttttactgaccatcactgaaggg
aagtttcatcaggttaaaagaatgttttttgcggtaaaaaataaagttacggccctacac
cgctgcaaaattggagggctctcgctcgacattcctgaaggagcgtggcgagagatcaac
aaaaaagaggtggagcaataa
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