Persicobacter psychrovividus: PEPS_12640
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Entry
PEPS_12640 CDS
T09740
Symbol
rfaF
Name
(GenBank) ADP-heptosyltransferase
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
ppsv
Persicobacter psychrovividus
Pathway
ppsv00540
Lipopolysaccharide biosynthesis
ppsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PEPS_12640 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppsv01005
]
PEPS_12640 (rfaF)
Enzymes [BR:
ppsv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
PEPS_12640 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
ppsv01005
]
Core region
PEPS_12640 (rfaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Thioredoxin_9
Motif
Other DBs
NCBI-ProteinID:
BDC98983
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All DBs
Position
1496414..1497457
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AA seq
347 aa
AA seq
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MSQKLQKFLVMQTAFIGDVILATAVIEKIHAAFPEATIDFLLRKGNEGLLKGHPYLGKVY
VFDKKGGKFKEMKRLIGEVRKERYDKVINLQRFFSSGFICAASGAKETIGYKKNPMSWAF
SSKKDHVFSEVGDENILHEVGRNQALIADFTDPQAVRPKLYPTAENFQKVATYTAEPFVC
MAPTSVWFTKQFPASRWVSLIDALPESLKIYILGAPADKAVCQQIIDQTKRKNALNLAGE
LNLLDSAALMSKSQLNYVNDSAPMHLASAVNAPTVAIYCSTVPAFGYGPLAEFSKVVEVR
KPLACRPCGIHGHRNCPKKHFDCGHKINMDTLVDAYTEAVAFQQKNR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaaattacagaaatttttagtgatgcaaactgcgttcattggcgatgttatc
ctggcaaccgcggtgatcgaaaaaatacatgctgcttttcccgaagcgaccatagacttt
ttactgagaaagggcaatgaaggacttttgaaaggtcacccttaccttggtaaggtgtat
gtttttgataaaaaaggcgggaagttcaaagagatgaagcgcctgattggtgaggtgaga
aaggagcgatatgacaaggtgatcaaccttcagcggttcttttcttctggttttatctgt
gcggcatctggagccaaagaaacgattggctataagaaaaatccgatgtcatgggctttc
agcagtaaaaaagaccatgttttttctgaagtaggcgacgaaaatatccttcatgaagtg
gggcgtaatcaagccttgattgccgactttacggaccctcaggccgtgcgacccaaattg
tacccaaccgcggaaaattttcagaaagtggccacctacactgctgagccttttgtatgt
atggctcctacaagcgtatggtttaccaagcaatttcctgcaagtcggtgggtgtcactg
atcgatgcattgcctgaatcgctgaaaatttatattttgggagcgccagcagataaggct
gtttgtcagcaaattatagatcagactaagcgaaaaaatgcgctgaatttggcaggagaa
ttgaacttgcttgattccgctgctctgatgtcaaaatcacagcttaattatgtgaacgat
tccgctcctatgcatttggcatctgcggtgaatgcaccaaccgtcgcgatttattgctcc
acggttcctgctttcggctatgggcccctggcagaattcagcaaggtggtggaggtcaga
aagccgcttgcttgccgtccttgtggcattcatggacatcggaattgtcctaaaaagcat
tttgactgtggccataaaataaatatggataccctcgtagacgcctatacggaggcagtg
gcatttcagcaaaaaaatcggtag
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