Persicobacter psychrovividus: PEPS_12730
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Entry
PEPS_12730 CDS
T09740
Symbol
fadD_2
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppsv
Persicobacter psychrovividus
Pathway
ppsv00061
Fatty acid biosynthesis
ppsv00071
Fatty acid degradation
ppsv01100
Metabolic pathways
ppsv01212
Fatty acid metabolism
ppsv02024
Quorum sensing
ppsv04146
Peroxisome
Module
ppsv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PEPS_12730 (fadD_2)
00071 Fatty acid degradation
PEPS_12730 (fadD_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PEPS_12730 (fadD_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PEPS_12730 (fadD_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppsv01004
]
PEPS_12730 (fadD_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsv04147
]
PEPS_12730 (fadD_2)
Enzymes [BR:
ppsv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PEPS_12730 (fadD_2)
Lipid biosynthesis proteins [BR:
ppsv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PEPS_12730 (fadD_2)
Exosome [BR:
ppsv04147
]
Exosomal proteins
Exosomal proteins of breast milk
PEPS_12730 (fadD_2)
Exosomal proteins of breast cancer cells
PEPS_12730 (fadD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BDC98992
UniProt:
A0ABN6LBF4
LinkDB
All DBs
Position
1504293..1505963
Genome browser
AA seq
556 aa
AA seq
DB search
MENQHEAFFWQKNYPEGVPFDIDPGKYESLVDLFEETVEQHNSKVAFDNFDKELTYAELE
LYSRYFGAYLQQELGLKKGDAIAIQIPNLLQYPIALWGALRAGLVVVNTNPLYTPREMEH
QFKDAGVKAILIYENFAYNLQTIVRNTDIETVIVTGTGDMLGTLKGFIVNLVVRHVKKMV
PKYHLPDAVSFKEVLDIGKKKTLNTIKPAAEDIAFLQYTGGTTGLSKGAMLTHRNIIAAL
EGSTAWVKPVLPASGAIIVTALPMYHIFALTANCLLIFKLGGKNILITNPRDLPAFIKTI
SKHRFNMISGVNTLFNAMLNHPDFGMINFDELKVTLGGGMAVQDAVAQKWEEATGCPLAE
AYGMTETSPGITINPLDGNHRMSSIGLPFPSTEVKIMSDEGVEVPHGEHGELWVRGPQVM
KGYWKNEAATNEMFDGEWLKTGDIATVDDDGFFKIVDRKKEMILVSGFNVFPNEIENVIA
MHPKVLEVGAIGIPDERSGEKVKVFVVKKDDSLTADEVIEFCKAQLTAYKVPKEVAFKAE
LPKTNVGKILRRKLKE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcagcatgaagcctttttttggcagaaaaattaccccgaaggagttcccttt
gatattgaccctggaaagtatgaatctttagtcgacctatttgaggaaacggtcgaacag
cataacagcaaagttgcttttgataattttgacaaggaattgacttatgctgaattggaa
ctgtattcccgttattttggggcttaccttcagcaggaattaggtttgaaaaaaggcgat
gcaattgccattcaaattccaaaccttctacagtatcctattgcactttggggggcattg
cgtgctggcctggtggtggtaaataccaatccactgtatactcctcgggaaatggagcat
caatttaaagatgcaggggtgaaggcgattttgatttacgaaaattttgcctacaattta
cagacgatcgttcgcaataccgatattgaaaccgtgattgtaactggaacgggcgatatg
ttggggacactaaaaggctttattgtcaatttagtggtgcggcatgtcaaaaagatggta
cctaaatatcaccttcctgatgcggtctcattcaaggaagtgcttgatattggtaaaaag
aaaacactgaatacaattaagcctgcggctgaggatattgcctttttacaatacactggc
ggaaccacgggcttgtcaaagggggcgatgctgacccaccgaaatattattgccgcactc
gaagggagcaccgcatgggttaagcccgttctgcctgcaagtggtgcaattatcgttacg
gctttgccgatgtatcatatttttgcattgacggccaactgccttttgatttttaagctt
ggcggtaaaaatattctgattaccaacccgcgagatcttcccgcttttattaaaacgatc
agtaagcaccgtttcaatatgatttcaggggtaaacaccctctttaatgcgatgctgaac
catcctgattttggaatgattaatttcgatgaattaaaagtgacacttggtggtggtatg
gcggttcaggatgccgtagcacaaaaatgggaagaagccacaggatgtccattggcggag
gcttatggcatgacggaaacttctccaggaatcaccattaaccctttggacggtaaccat
cgaatgagttctattggcttgccgtttccatcaactgaggtgaaaattatgagtgatgag
ggcgttgaggtgccccatggtgaacatggtgagctttgggttcgtgggcctcaggtgatg
aaggggtattggaaaaatgaagcggcgacgaatgaaatgtttgacggagagtggttgaaa
actggcgatattgcgacggtggatgatgatggcttttttaagattgtggaccgtaaaaag
gaaatgattttggtgtctggctttaatgtttttcccaatgaaattgaaaatgtgatcgcc
atgcacccgaaggtattggaagtcggggcgataggtattcccgacgagcggagcggggaa
aaggtgaaggtttttgtggtgaagaaagacgactccctcaccgcggatgaagttattgaa
ttttgtaaagcccagcttaccgcttacaaggttccaaaagaggtcgcttttaaagctgag
ctgcccaaaacgaatgtcggaaaaatcctcagacgaaaattgaaagaataa
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