Persicobacter psychrovividus: PEPS_13430
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Entry
PEPS_13430 CDS
T09740
Symbol
fadD_3
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppsv
Persicobacter psychrovividus
Pathway
ppsv00061
Fatty acid biosynthesis
ppsv00071
Fatty acid degradation
ppsv01100
Metabolic pathways
ppsv01212
Fatty acid metabolism
ppsv02024
Quorum sensing
ppsv04146
Peroxisome
Module
ppsv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PEPS_13430 (fadD_3)
00071 Fatty acid degradation
PEPS_13430 (fadD_3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PEPS_13430 (fadD_3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PEPS_13430 (fadD_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppsv01004
]
PEPS_13430 (fadD_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsv04147
]
PEPS_13430 (fadD_3)
Enzymes [BR:
ppsv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PEPS_13430 (fadD_3)
Lipid biosynthesis proteins [BR:
ppsv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PEPS_13430 (fadD_3)
Exosome [BR:
ppsv04147
]
Exosomal proteins
Exosomal proteins of breast milk
PEPS_13430 (fadD_3)
Exosomal proteins of breast cancer cells
PEPS_13430 (fadD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF8090
Motif
Other DBs
NCBI-ProteinID:
BDC99062
UniProt:
A0ABN6L770
LinkDB
All DBs
Position
complement(1587233..1588918)
Genome browser
AA seq
561 aa
AA seq
DB search
MNHKPWLKNYPHNVPENIDPNIYTSLVELIEVAVKKFDHQVAFENMGASLTYKQVDTLSN
DFAAYLQGPLGLKKGDRIAIQMPNLLQYPIVMFGALKAGLIVVNTNPLYTTREMAHQFND
AGVKAIVIVANFAANLEAIIKETAIQHVIVTQLGDMLGTLKGSLVNLVVKHLKKMVPDYT
LSGHIKFKEALKEGKALQLQKVDVQPEDIGFLQYTGGTTGISKGAKLTHRNIIANMEQNG
AWMMSGLEEGKEVVITALPLYHIFAMTVNCWLFFKTGGKNILITNPRDLPAFIKELKKHQ
FSVFTGVNTLFNALLMQEDFLKLNFDNFKVGIGGGMAVQDHVAEKWKQVTGKPLAEGYGL
TEASPVVACNPIDGTEKIGTIGMPLPSTEIRIVADDGTDQDFAEHGEVYVRGPQVMAGYW
QRNDETELVMDGQWLKTGDIGYMTLEGYIKLVDRKKEMINVSGFNVYPNEVESVVCSHPK
VAEAGVIGIPDPKSNECVKAFIIKADQSLTKEEILQYCRAEMTAYKRPREIEFLEELPKS
NVGKILRRKLKEYELSKNVTA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacaaaccttggctaaaaaactaccctcataacgtccccgaaaatattgacccc
aatatatatacttcacttgtagagctgatcgaagtggcggtgaagaaatttgaccatcag
gtggctttcgagaatatgggcgcaagccttacctataaacaggtcgataccctcagtaat
gattttgccgcctaccttcaggggccccttggattgaaaaaaggagaccgcattgcaatt
cagatgcccaaccttttgcaatacccgattgtcatgtttggcgcactgaaagctgggctg
attgtggtgaacaccaatcctttatataccacccgggagatggcacatcaatttaatgat
gcaggcgtaaaagcgattgtcatcgttgccaatttcgcggccaaccttgaagccatcatt
aaagagaccgccattcagcatgtgatcgttacacagctcggtgatatgctcgggacactc
aaagggtcgttagtcaatctggtggtgaaacacctcaaaaaaatggttcctgattacacc
ctttcgggccatattaaattcaaggaagccctgaaagaaggaaaggcactccaacttcaa
aaggtagatgtgcagcctgaggatattggttttctgcaatatactggcggtacgacaggc
atctccaaaggcgcgaaattgactcaccggaatatcatcgccaatatggagcaaaatggc
gcatggatgatgagcggcctcgaagaaggtaaagaagtggtgattactgcccttcctttg
tatcatatttttgccatgacggtcaactgctggctgttcttcaaaactggtggaaaaaac
atcctgattaccaatccgagggatttacccgcttttatcaaggaacttaaaaagcatcag
ttctccgtattcaccggcgtcaatacgctctttaatgccctactgatgcaagaggatttc
ctcaaactgaatttcgacaatttcaaggtcggtatcggcggtggaatggcggtgcaggat
catgtggctgaaaaatggaagcaagtaacaggaaaaccccttgcggaaggttatggcctt
acggaagcctctcctgtggtagcctgtaaccccattgatggcacagaaaaaattggcacc
attggcatgcctttgccaagcaccgaaattcggattgttgctgacgacggcacggatcag
gattttgcggagcatggagaggtttatgttcgagggccgcaggtcatggcgggctactgg
cagcgcaatgacgaaaccgagctcgtgatggacggacaatggctgaaaacaggcgacatc
ggctacatgaccctcgaggggtacatcaaacttgtggatcgcaaaaaagagatgatcaat
gtttcaggcttcaatgtttaccctaacgaggtggaaagcgtggtttgctcccacccaaaa
gtggccgaggctggggttattggcattcctgatcctaaatctaacgaatgcgtgaaagca
tttattattaaggcggatcagagtctgaccaaagaggaaatccttcaatattgcagggca
gaaatgacggcctataagcgcccgagagaaattgaattcctggaggagttaccaaaatca
aatgtgggaaaaattcttcgtcgaaaactcaaagaatatgagctttcaaaaaatgtaacg
gcttaa
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