Persicobacter psychrovividus: PEPS_15810
Help
Entry
PEPS_15810 CDS
T09740
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppsv
Persicobacter psychrovividus
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppsv03016
]
PEPS_15810 (truB)
Enzymes [BR:
ppsv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PEPS_15810 (truB)
Transfer RNA biogenesis [BR:
ppsv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PEPS_15810 (truB)
Prokaryotic type
PEPS_15810 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BDC99300
UniProt:
A0ABM7VEN2
LinkDB
All DBs
Position
1891333..1892019
Genome browser
AA seq
228 aa
AA seq
DB search
MDLKDLDFLAGQVLLIDKPKTWTSFDVVGKLRNLIKIKKIGHAGTLDPLATGLLILCTGK
MTKQIESYQAQEKEYTGTITLGQTTPSYDAETEVDAEKDIQHLTAEMVHEAVPAFLGEIE
QIPPMYSAIKVNGQRLYKAARKGKTVEVKARQVTIHEFEITNIDFPKVDFRIVCSKGTYI
RSIAHDLGQALNVGGHLAALRRTRIGDFKVEDARTVEDFIAAFKKEEN
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaggacttagatttcctggcagggcaagtgttgttgattgacaaaccaaaa
acttggacctctttcgacgtagtgggaaaattgagaaatctgatcaaaataaaaaaaatt
ggccacgcaggtactttagatccattagcgacaggccttttgattttgtgcacaggtaaa
atgacgaagcagatcgaatcttaccaagcacaggaaaaagaatatacaggcaccattacc
ctggggcaaaccaccccatcctatgatgcggaaacggaggttgatgccgaaaaggacatt
cagcatttaactgctgaaatggttcatgaagctgtgcctgcatttttgggcgaaattgag
cagattccgccgatgtattcagcgattaaagtcaatggccaacgcctttacaaggctgcc
cgcaaaggcaaaaccgtagaggttaaagcacgacaagtgaccattcacgagtttgaaatc
accaatattgatttcccaaaggtggatttcagaattgtttgctccaaaggcacctacatc
agaagtattgcccatgatttgggccaggcactgaatgttggcggccaccttgcagcttta
cgaagaacccgtattggagactttaaagtagaagacgccagaactgtcgaggactttatc
gctgcctttaaaaaagaagaaaattaa
DBGET
integrated database retrieval system
