Persicobacter psychrovividus: PEPS_19380
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Entry
PEPS_19380 CDS
T09740
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ppsv
Persicobacter psychrovividus
Pathway
ppsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PEPS_19380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsv02000
]
PEPS_19380
Enzymes [BR:
ppsv01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PEPS_19380
Transporters [BR:
ppsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PEPS_19380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_24
AAA_5
AAA_29
AAA
AAA_22
RsgA_GTPase
IstB_IS21
AAA_15
ABC_membrane_2
AAA_PrkA
AAA_18
Zeta_toxin
AAA_21
AAA_25
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
BDC99657
LinkDB
All DBs
Position
2304882..2306717
Genome browser
AA seq
611 aa
AA seq
DB search
MKNYLRVLGFARPVGMKVPAYVVFTIFQTIFSLINFTLLIPVLNLLFDPKNAAANPVTAL
PSFAFTKDYFLDLFNYYFTHFIQVYGPAGALKYVCAVLIVSNLLANLFRYLGALILISMR
SQVIYNLRHSLFKKINQLHLGFFTHHPKGDLITRITSDVTEVEASVVNTMTVVFKEPILI
ISYFFLLFSMSSKLTLTALLVLPVSGGIIASLAKKLKSVSQDHAISFASIMSQLDESLGG
IRIIKAFGAEGFIGKRFDTELNRFRKLTITYASRSEGASPLSEFLGVFVVIGLLYIGSSM
ILKDEPEISGSVFISFMIIFSQVLTPAKNISKSFSNIHRGLVSANRIFTLLDTDPAIKNT
PQAIEKGKFNDKISFNNVHFSYDDSEEEVIKGVSFDIKKGQTVALVGPSGGGKSTLADLL
PRFFDIQKGSITIDGQDISKLTIESLREEMGIVSQESVLFNDTIHNNIAFGIPNTSREQV
MEAAKIANAHQFVSEMEDGYDTIIGERGSKLSGGQRQRISIARAVLKNPEILILDEATSA
LDTESEKLVQDALNKLMNNRTAFVIAHRLSTIQHAHQILVVQHGTIVERGTHTELLERDG
LYKKLQDLQAT
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattatttaagagtattaggtttcgcaagacccgtaggaatgaaggtacccgct
tatgtggtattcactattttccagacgatctttagcttaatcaattttacattattgatc
ccggtgctgaatttgcttttcgaccctaaaaatgcggcggcaaacccagtaacggcttta
ccttcctttgcttttacaaaagattatttccttgatcttttcaattattatttcacccac
ttcattcaggtttatggccctgcgggtgcattaaagtatgtttgtgcggtactgatcgtt
tcgaacttactggccaacctgttccgatatttaggcgcactgatattgatctccatgcgt
tcacaggtgatttacaacttgagacattcgcttttcaagaaaatcaaccagcttcattta
ggctttttcacccatcaccctaaaggggatttgatcaccagaattacctcggatgttacg
gaagtggaagcctcggtagtcaataccatgacggtggtttttaaagaacccatcctgatc
atcagctacttcttcttgcttttcagcatgtcgtccaagcttaccctgacggctttgttg
gtactgccagtttctgggggaatcattgccagcctggccaagaaacttaaaagtgtttcg
caggatcacgccatctcttttgcctctatcatgagccagctggatgaatcccttggaggg
atccgaatcatcaaagcatttggtgctgaaggctttattggcaaacgatttgacacagag
ttgaaccgattcagaaaattgaccattacctatgcctcccgcagcgaaggcgccagtcca
ctctcagaattcctcggtgttttcgtggtcataggcttgttgtacattggcagctcgatg
atcctgaaggacgaaccagaaatttccggatcggtattcatctcattcatgattatcttt
tcacaggtacttactcctgccaaaaatatttcaaaatctttctccaacatccatagggga
ttggtttccgccaacaggattttcactttactggacactgacccagccattaaaaacacg
cctcaagccattgagaaagggaagtttaatgacaaaatcagctttaacaatgtccacttc
agttatgatgactcggaagaagaagttataaaaggggtctcttttgacattaaaaaaggg
caaaccgttgcattggtgggaccttccggaggaggaaaatctaccctggccgatttactg
ccacgcttcttcgatattcagaaaggaagtatcaccattgatgggcaggacatctctaag
ctgacgatcgaaagcctgagagaagaaatgggaattgtatcgcaagagtcggtgctcttt
aatgataccatccataataatattgcattcggtattccaaacacctcgagggaacaagtg
atggaggcggcaaaaattgccaatgctcaccagtttgtttctgaaatggaagatggctac
gacaccattatcggtgaacgcgggtcaaaactttccggtggccagcgccagcgcatcagt
attgcacgcgccgttttgaaaaatccggaaatcctgatccttgatgaagcaacaagtgcg
ctggatacagaatctgaaaaactggtacaggatgcgctgaataagctgatgaacaataga
acggcctttgttattgcccaccgactgagtaccattcagcatgcacatcaaattttggtg
gtgcaacatggtaccattgtcgagcgagggacacatactgaactattggaacgcgacggg
ctctataaaaaactgcaagacttgcaggcgacctaa
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