Persicobacter psychrovividus: PEPS_20030
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Entry
PEPS_20030 CDS
T09740
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppsv
Persicobacter psychrovividus
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppsv03016
]
PEPS_20030 (truA)
Enzymes [BR:
ppsv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PEPS_20030 (truA)
Transfer RNA biogenesis [BR:
ppsv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PEPS_20030 (truA)
Prokaryotic type
PEPS_20030 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BDC99722
LinkDB
All DBs
Position
2370419..2371174
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AA seq
251 aa
AA seq
DB search
MRYFIEIAYKGTNYHGWQSQKNQTVPTIQGVLEKALSTILRTPIEILGSGRTDTGVHAKQ
TFAHFDVAEALDCEKYVYKFNALLPFDISIMRMFPVDDQTHARFDATTRSYEYHLHLSRD
PFLQELSYFHKEPVNVERMNEAAKLLLGRKDFQCFSKVKTDVNNYFCEIFHAQWELRDKD
HLIFHITANRFLRNMVRAIVGTLLEVGRERMTPQQVLEVIDSKNRSVAGRSVPSDGLYLS
KVLYPFIKENA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
ttgcgatactttatcgagatcgcctataaaggcacaaattaccatggctggcagagccaa
aaaaaccagacagtacccactattcagggggttttagaaaaagcgttgagcacaatactg
agaacgcccattgaaattctgggcagtggccgaacagataccggcgtgcacgccaaacaa
acattcgcacattttgatgtcgctgaagcgctggattgcgaaaaatatgtatataaattc
aatgccctgttaccctttgatatcagcattatgcggatgttccctgtcgatgatcagaca
catgcccgcttcgatgccaccacacgaagctatgaataccacctccacctgagtcgggac
ccctttcttcaggaactgagttattttcataaggagcctgtgaatgtggaacgaatgaat
gaggccgcaaaactccttttgggcaggaaagattttcagtgcttctccaaagtaaaaacg
gatgtcaataattatttttgtgaaatatttcatgcacaatgggaactcagggataaagat
catctgatatttcacattaccgccaaccgattccttagaaatatggttcgtgccatagtg
ggcacactgcttgaagtgggccgcgagcgcatgactccacaacaggtgcttgaggtcatc
gacagcaaaaaccgaagcgttgccgggcgttccgttccttctgatggtttatatttatca
aaagtcctttacccgtttataaaagaaaatgcgtaa
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