Persicobacter psychrovividus: PEPS_21460
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Entry
PEPS_21460 CDS
T09740
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ppsv
Persicobacter psychrovividus
Pathway
ppsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PEPS_21460 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsv03400
]
PEPS_21460 (recO)
DNA repair and recombination proteins [BR:
ppsv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PEPS_21460 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PEPS_21460 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
BDC99865
LinkDB
All DBs
Position
complement(2546322..2547017)
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AA seq
231 aa
AA seq
DB search
MLEKTRGVVLNYIKYRESSIIVRIYTEAFGMRSYIVNSVRKARAKQNKIALFQPLSLLDL
VVYEKPGKDLNRISEVQLAYPLQSIPFDVMKSSVALFITEVLGQLLKHEQEANEHMFQYL
YYAVQAFDQMEERFQNFHLQFLLKAGQPLGLGVTTGDQIIAEVIQWADDPTIAQQEKAVL
EQLRSASFGDHIPMDNFMRRTVLAHLLRFYQEQVHGFGQIQSLAVLKEVLS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaaaaccagaggcgtcgtactcaattacatcaaatatcgggaaagctcgatc
attgtgcgcatttataccgaagccttcggtatgcgttcctacatcgtcaatagtgtgcgg
aaggctcgggcaaagcaaaataagatcgccctttttcagcctttgtcattgcttgatttg
gtggtttatgaaaagccaggcaaggatctgaaccgcatttccgaggtacaactcgcttat
cctttgcagtcgattccttttgatgtgatgaaatcctcggtagcactattcatcaccgaa
gtgttggggcagttgctcaaacatgagcaggaagccaatgagcacatgtttcagtatttg
tattatgccgtgcaggcctttgatcagatggaagaacgctttcagaacttccacctgcaa
tttctcctgaaagcagggcaacccctcggtttgggggtgaccactggcgatcagattatt
gctgaagtgattcagtgggcggatgatcctaccattgcccaacaggaaaaagcagtcctt
gaacagttgcgttccgcctctttcggcgaccatatcccgatggataatttcatgcgccga
acggtgcttgcccacctgttgcgcttttatcaggagcaggtgcacggctttgggcagata
cagtcgctggcagttttgaaagaggtgttgtcgtga
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