Persicobacter psychrovividus: PEPS_21860
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Entry
PEPS_21860 CDS
T09740
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppsv
Persicobacter psychrovividus
Pathway
ppsv03030
DNA replication
ppsv03430
Mismatch repair
ppsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PEPS_21860
03430 Mismatch repair
PEPS_21860
03440 Homologous recombination
PEPS_21860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsv03032
]
PEPS_21860
03400 DNA repair and recombination proteins [BR:
ppsv03400
]
PEPS_21860
Enzymes [BR:
ppsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PEPS_21860
DNA replication proteins [BR:
ppsv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PEPS_21860
DNA repair and recombination proteins [BR:
ppsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PEPS_21860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
DNA_pol3_gamma3
AAA_14
AAA_2
AAA_5
RCF1-5-like_lid
AAA_30
Rad17
TIP49
AAA_18
AAA_24
AAA_7
AAA_16
VapE-like_dom
Mg_chelatase
AAA_19
RNA_helicase
AAA_assoc_2
PIF1
ResIII
Barwin
DAP
QueC
AAA_33
Motif
Other DBs
NCBI-ProteinID:
BDC99905
LinkDB
All DBs
Position
2602446..2604296
Genome browser
AA seq
616 aa
AA seq
DB search
MEKFVVSARKYRPATFDSVVGQKHITTTLINAINNNHLAQAFLFCGPRGVGKTTCARILA
KTINCTDRQENGEACGKCDSCTSFQNNASFNVHELDAASNNSVDDIRNLVEQVRYAPQSG
QYKVYIIDEVHMLSNQAFNAFLKTLEEPPSYAIFILATTEKHKIIPTILSRCQIFDFNRI
TVGDMTSHLMNIAEKESIDAEDEALHLIAQKADGALRDALSIFDLVCTFAAGEKVTYKNT
VDNLHVLDYDYYFKIVDLCLAENHPEILITFDEILRKGFDGHNFIIGLAEHLRNLMVCRD
KQTVQLLEVSETVQEKYRSQAMEAPISFLLSGLNLLSNCDLQYKAAKNQRLHVELCLMKL
AHLNAAITLSRAAAAVEKKKAELRAANPKPATATAKSSSNKLAAPKSTNTVQEPTPKPIA
QSAQTAPKPVAKPAAQTPPPLGRPSIATRPTTIGNAQKPGGMPSFADLKARVQQKSTQQE
NQQEQTENQQTAELQNRPFTVQDVEKAWNLFSEQLRHENNQTALSVMHQKWALEGTVLKL
QLSSVLQQDLLEKFRMELVQFMKLKLDNSNFKLEVNIVEGETRKMIYTPKEKYVHLMEKY
PELDKFREFLNLDFDM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttgttgtctctgcccgaaaatatcgcccggccacctttgatagtgttgtc
ggccaaaagcacatcacaacgacgttgatcaatgcgattaacaacaaccaccttgcgcag
gctttcttattctgcggaccaagaggggtgggtaaaactacctgtgcgcgtattttagca
aagacaatcaactgtactgatcggcaggaaaatggggaagcctgcgggaaatgtgattcc
tgtacctcatttcagaacaacgcctctttcaatgttcatgagctcgatgcggcctccaac
aactccgtggatgacatccgtaacctcgtagaacaggtacgctacgcaccacagtcgggg
cagtataaggtgtatattattgatgaggtgcacatgctctccaatcaggcgtttaatgcc
tttctgaagaccctcgaagagccgccatcgtatgccattttcattttggcaaccaccgaa
aagcacaaaattattccgaccattctctctcgttgtcagatctttgatttcaaccgcatt
actgtgggcgacatgacaagccacctgatgaatattgccgaaaaagaaagtattgatgct
gaggatgaagccctgcacctgattgcccaaaaggcggatggtgccttgcgtgacgccctc
tcgatctttgacctggtctgtacttttgccgcaggagaaaaggttacttataagaatacc
gtggacaacctccacgtactcgattatgactattacttcaaaattgtagacctctgcctc
gcagaaaatcatccggaaatcctgattaccttcgatgaaattcttcgcaaaggttttgat
ggccataattttattatcggattggcggaacacctgcgcaacctgatggtttgccgcgac
aaacaaacggtacaactccttgaagtatcagaaaccgtgcaggagaaataccgcagccag
gcgatggaggctccaatctctttccttttaagcggactgaatttactcagcaattgcgac
ctgcagtataaagcggcaaaaaaccagcggctacatgtagagctttgcctgatgaagctt
gcccatctgaatgcggccattaccctgagccgtgcggcagcagccgttgaaaaaaaaaaa
gctgaattaagggccgcaaacccaaagccggcaacggcaacggcaaaaagtagcagcaac
aagctggcggctccaaaatctaccaatacggtacaggagcctacgccaaagcctattgcc
caaagtgcacaaacggcgcccaagccggtggcaaaacctgcagcacagacgcccccaccg
cttggccgtccaagcatcgctacacgccctaccaccatcggtaatgcccaaaagcctgga
ggaatgccctcttttgctgacctgaaagcacgtgttcagcaaaagtccacacaacaggaa
aatcagcaggaacaaacagaaaaccaacaaacggccgaactgcaaaatcgcccttttacc
gttcaggatgttgaaaaagcctggaatttgttcagtgagcagctccgccatgaaaacaac
cagactgctttgagtgtgatgcaccaaaaatgggctcttgaaggcacggtcctcaaattg
cagctctcgagtgttttgcagcaagatttactggaaaaattccgaatggagttggtgcag
ttcatgaaactgaaactcgacaacagcaacttcaaacttgaggtgaatattgtagaaggg
gaaaccagaaaaatgatctacaccccgaaggaaaagtacgttcacctgatggaaaaatac
cccgagctggataaattccgtgagtttttgaatcttgatttcgacatgtaa
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