Persicobacter psychrovividus: PEPS_24270
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Entry
PEPS_24270 CDS
T09740
Name
(GenBank) hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ppsv
Persicobacter psychrovividus
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsv03009
]
PEPS_24270
Enzymes [BR:
ppsv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PEPS_24270
Ribosome biogenesis [BR:
ppsv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PEPS_24270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
DUF1062
DUF6695
Motif
Other DBs
NCBI-ProteinID:
BDD00147
LinkDB
All DBs
Position
complement(2873080..2874111)
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AA seq
343 aa
AA seq
DB search
MTKPRRSNSKGGSIGSQKGGGGFKKSSSFRGKKNHSDKFKSSEDRRGHSTDQKEVPSKTE
RGSKKRSVKENYHARQEQVEKAKTPNYNFQKMKEIAKKKAKVTETPVAHEIRLNKFIANA
GVCSRREADTLIAEGQISVNGQVVKEMGYKVAFRDKVTWLGKLLSREKLVYVLLNKPKDF
LTTTDDPQNRRTVMELVKKAATERIYPVGRLDRQTTGLLLMTNDGELAEKLAHPSNDIKK
VYQVTLDKPITPEDFDKVLNTVELEDGPVPVDDLALLSADATTLGIEIHLGRNRIVRRTF
EHLGYEVVKLDRVVYAGLDKKDLPRGKWRYISEKELIKLKYFL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaccaagacgtagtaattcaaaaggaggatcaatcggatcccaaaaaggagga
ggagggtttaagaaatcatcttcattccgcggaaaaaagaatcattcagacaaatttaaa
tcgtcggaagatcgtcgaggacatagtactgaccaaaaagaggtgccttctaaaacagaa
agaggaagtaaaaaacgatctgtaaaagaaaattatcatgcccgccaagaacaggtggaa
aaggccaaaacgcctaattataattttcagaaaatgaaggagatcgctaaaaagaaagcg
aaagtaacagaaactcctgtggctcatgaaatccgcctaaacaagtttattgccaatgcg
ggtgtttgtagccgacgcgaagctgatacactgattgccgaaggccaaatttctgtgaac
ggacaagtggtgaaggaaatggggtataaggtggccttcagagataaggtaacctggtta
gggaaattgctgagcagagagaagttggtgtatgttcttctgaacaagccaaaagatttt
ctgaccactactgatgaccctcagaaccgacgcacggtgatggagttggtgaaaaaagcc
gctacggagcgtatctatcctgtagggcgacttgatcgtcaaacgacaggtttattgttg
atgaccaatgatggtgagttggcagaaaagttggcacacccatcaaatgacattaaaaaa
gtttatcaggttacgcttgacaagccgatcacgcctgaagattttgataaagtacttaat
accgtagagttggaagacggtcctgttcctgtggatgatttggcgcttttaagtgcagat
gccaccactttgggaattgaaatccacttgggtagaaaccgtatcgttcgtcgtaccttt
gagcatttaggctatgaggtggtgaagctcgatcgtgttgtttatgcaggtttagataag
aaagaccttccgcgtggaaagtggcgatacatttcagaaaaagaattgattaagttgaaa
tactttctataa
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