KEGG   Persicobacter psychrovividus: PEPS_25330
Entry
PEPS_25330        CDS       T09740                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ppsv  Persicobacter psychrovividus
Pathway
ppsv03030  DNA replication
ppsv03410  Base excision repair
ppsv03420  Nucleotide excision repair
ppsv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PEPS_25330
   03410 Base excision repair
    PEPS_25330
   03420 Nucleotide excision repair
    PEPS_25330
   03440 Homologous recombination
    PEPS_25330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsv03032]
    PEPS_25330
   03400 DNA repair and recombination proteins [BR:ppsv03400]
    PEPS_25330
Enzymes [BR:ppsv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PEPS_25330
DNA replication proteins [BR:ppsv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PEPS_25330
DNA repair and recombination proteins [BR:ppsv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PEPS_25330
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PEPS_25330
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 HHH_2 RNase_H_2
Other DBs
NCBI-ProteinID: BDD00253
UniProt: A0ABM7VH03
LinkDB
Position
2996866..2999781
AA seq 971 aa
MPSNKLFLLDAMALIYRAHFAFSKNPRINSKGFSTGAVLGFTNTLLEVLRKEKPTHIGVA
FDPPGPTFRHEEYVEYKAQRQETPEDIRMSIPIVKQLVQAFNIPILEVKGYEADDVIGTI
AKKASKEDFEVFMMTPDKDYAQLVEDHIFLYKPAYMGNAVDVLGINEVLAKFDLDRVDQV
IDYLGLMGDASDNIPGIPGVGPKTAVKYLKKYGSVEGLLENTHELKGKAKEKVEANKDQA
LLSKRLATIALDVPIAFDGEDLKLIPLNKEAVAEIFDEMEFRTLKRRVLGEDAPAAPTAN
TPAPPAPAAPSAGGQMDMFSQPQAKPQSQPAQMGLFDAAPKPKAAPKQTEAPNANPLEGH
AVVAEKSSFEQSKKNYHMVSTAEERQSLCEYLLQQDEVCFDTETSSLDPLKAQLCGISFA
YQANEAYYVHIPDETPELAQTVVEDFRAVFEHEQITKIGQNLKYDMLVLEKYNLQLKGPL
FDTMIAHYLLSPDGKHGMDVMAENYLNYSPISFKSLTGKEKDKAKDGLFYKVPVDKRVNY
AAEDADITLQLKQYFAPKLAEVASEDLMNGLEMPLLKVLEEMERNGVKINTDALADLSEE
LGAESKQIEDKIYAMAGKEFNIASPKQLGVILFDEMKLVDKPKKTKTGQYATGEEILSKL
AKEHEICALILAFRELNKLKSTYVDALPELIAEDGLIHTSYRQAVAATGRLSSTNPNLQN
IPIRTARGKEIRKAFVPRHEDHLILAIDYSQIELRIMAGFAQDQHMIQAFKNGEDIHRAT
AAKVFKVTPEEVDSDMRRKAKTANFGIIYGISAFGLSERLNIPRGEASDIIKAYFEEFPA
VKAYMDRVVNEAREQGYVETIMKRRRYLRDINSRNATVRGFAERNAINAPIQGSAADIIK
KAMINIAAWMRSENLQSKMIMQVHDELVFDVHKEELEKVKEKVTELMENAIEFEVPLLVE
AGVGENWLQAH
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgccatccaataaacttttcttgcttgatgcaatggcgctgatttaccgtgcgcacttt
gccttcagcaaaaacccacgaatcaattccaaaggtttcagtactggtgctgtccttgga
tttaccaatactttactcgaagtactgagaaaagaaaagcccacccatattggtgttgcc
ttcgatccgccaggcccgacttttcgccatgaggagtatgttgagtacaaagcacaacgg
caggaaaccccagaggacatccgcatgtctattccgattgtcaagcagttggtgcaggct
ttcaacattcccatccttgaagtaaaaggctacgaagccgatgatgtaattggaaccatt
gccaagaaagcatcaaaggaagatttcgaagtatttatgatgacgccggacaaggattat
gcccaacttgttgaagatcacatatttttgtacaaacctgcctatatgggcaatgctgtt
gatgtgctcggcatcaatgaagttttggctaaatttgacctcgaccgcgttgatcaagtg
attgactacctcggcctgatgggagatgcttccgacaatattccaggcattcctggggtt
gggccaaaaacagccgtgaagtacctgaaaaaatatggatcagtagaaggcttgctggaa
aatacccacgagctgaagggcaaggccaaagaaaaggtggaagccaataaagatcaggcc
ctgctctccaaaaggctggccactattgccctcgatgtaccgattgcctttgatggggaa
gacctgaaacttatcccgctgaacaaagaggctgtcgctgaaattttcgatgaaatggaa
ttccgcaccctcaagcgccgagtactcggtgaggatgctcccgcagcgcctacggccaat
acacctgcgcctcctgctcctgcagcaccttccgcaggggggcaaatggacatgttcagc
caaccacaggcaaaacctcagtctcagcccgcgcaaatgggcttgtttgatgccgcaccg
aagcccaaggccgcgccgaagcaaacggaggcacccaatgccaaccccttggagggacat
gccgtggtggcggagaaaagcagctttgagcagtcgaagaaaaactatcacatggtgagc
acggcagaagaacgccaaagcctttgtgaatatttgctccaacaggatgaggtttgcttc
gatacagaaacaagttccctcgacccgctgaaagcacaactttgcggaatctctttcgct
tatcaggccaatgaagcctattacgtacatattcctgatgaaacacctgaactggctcag
acggtcgttgaggatttcagggcggtgtttgagcatgagcagatcaccaagattggccag
aacctcaagtacgatatgctggtgttggaaaagtacaaccttcagcttaaagggccattg
ttcgataccatgatcgctcactacctgttatcaccagatggcaagcacggcatggacgtc
atggctgaaaattacctgaactacagcccaatttcttttaaatccctcacggggaaagaa
aaagacaaagccaaagatgggctcttctataaagtgcccgtcgataagcgtgtcaattat
gctgccgaggacgctgacattactttacagctaaagcaatactttgcccctaaactggct
gaagtagcctcagaggacctgatgaacggcctggagatgcctttactgaaagtattggaa
gaaatggagcgtaacggtgtcaagatcaatactgatgcccttgcggatttgtctgaagaa
ctgggtgccgagagcaaacagattgaagataaaatctacgctatggcgggaaaagaattc
aatatcgcttccccaaaacaactcggggtcatcctcttcgatgagatgaaactggtggat
aaaccaaaaaagaccaaaacggggcaatatgccactggggaggagattttatccaaactg
gccaaagaacatgaaatctgtgctttgattctcgcatttcgggaactgaacaaactgaag
tccacttatgtagatgccctgcccgagctgattgccgaggatggcctcattcatacttcc
taccgacaggcagttgccgccacaggacgactgagttctaccaaccccaatttgcaaaat
atcccgatcagaactgcaaggggtaaggaaatccgcaaggcttttgttcctcgccacgaa
gaccacctgatcctcgccattgactactcccagattgagttgcgcattatggcgggtttt
gcacaggatcagcacatgattcaagcctttaaaaatggggaagatattcaccgtgctacc
gcagcgaaagtgttcaaggtaacgccagaagaagtggacagcgacatgcgccgtaaagcc
aaaacggccaactttgggattatctatggtatttcggctttcgggctttccgaaaggctc
aatattccgaggggcgaagcttctgacattatcaaggcgtactttgaagaatttcccgca
gtaaaggcctatatggaccgtgtagtgaatgaggcccgcgaacagggctatgtggaaacc
attatgaagcgtcgtcgatacctcagggacattaactcgcggaatgccaccgtgcgcggt
tttgccgaacgaaacgccatcaatgcaccgattcagggatctgctgccgacatcatcaaa
aaagcaatgatcaatattgccgcatggatgcgatcagaaaatttgcagtcaaaaatgatc
atgcaggtacatgatgaattggtttttgatgtacacaaagaggagctggaaaaggtcaag
gagaaagtaacagaactgatggaaaatgccattgagtttgaagtaccgctactggtggaa
gctggtgtcggcgagaactggctgcaggctcattaa

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