KEGG   Persicobacter psychrovividus: PEPS_26430
Entry
PEPS_26430        CDS       T09740                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ppsv  Persicobacter psychrovividus
Pathway
ppsv02020  Two-component system
ppsv02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ppsv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PEPS_26430 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    PEPS_26430 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppsv03021]
    PEPS_26430 (rpoN)
Transcription machinery [BR:ppsv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PEPS_26430 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_12 SF3b1 MarR
Other DBs
NCBI-ProteinID: BDD00363
UniProt: A0ABM7VI02
LinkDB
Position
complement(3128500..3129948)
AA seq 482 aa
MQKLGLTQSLSQKLSPQQIQFIKLLQVPTAELEARVEEELEANPALEEGRDEADELYAQD
DYEAPESGDEYMDNEISVEEYLHDDFSGYKMYGDGNGDEEDKDIPISSMTTLQEQLKDQL
SFLRLSDHQRLLGEQLIGSIENDGYIRRDLEMIVNDLAFSRNIETSLEELEEVLVQIQSF
DPAGIAARDLQECLLIQLKRRQEPDEATQDAIRIIEESFNDFTKKHYEKIMRRLNIKEED
RLRDAMETIVRLNPKPGGITDGLVKNQYLIPDFILTNDNGKLDLTLNSKNAPDLKVSRSY
AEMMDAYDKSDKKDKKLRDTVMFVKQKLDAAKWFIDAIRQRQETLLNTMGCIMVHQHDFF
LTGDEAKLRPMILKDIADKIEMDISTVSRVANSKAIQTEFGIFPLKYFFSEGITTDTGED
VSSREVKHVLKGMIEKEDKKKPLSDDKLEKLLKERGYKIARRTVAKYREQLNIPVARLRK
QL
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgcaaaaattaggactaacgcaatcgttatcacagaagctatctccgcaacaaatccag
tttattaagttgttgcaggtgccgacagcagagctcgaagctcgtgtggaagaggaattg
gaggcgaatccagctttggaagagggtcgcgatgaagccgatgaactttatgcgcaggac
gactatgaagcacctgaaagcggcgacgaatatatggacaatgaaatcagtgtggaggaa
taccttcatgatgatttcagtggttataaaatgtatggcgatggcaatggcgatgaagag
gataaggatatcccgatctcttcgatgaccacccttcaggagcaactgaaagatcagctg
agctttttgaggctttcggatcatcagcggcttttgggcgaacagctcattggcagtata
gaaaatgacggctacattcgtcgtgatctggagatgattgtgaatgatttggccttctca
agaaatatcgaaacctcccttgaagaactcgaggaagttttggtacagattcagtccttt
gaccctgccggcattgcggcgcgggatcttcaggaatgtctgttgattcagcttaaaaga
agacaggagcctgatgaggccacacaggacgccatccgtattattgaagaatccttcaat
gattttaccaaaaagcattacgagaaaattatgcgacggctgaacatcaaggaggaagat
cgccttcgtgatgccatggagaccatcgtgcggttgaatcccaagccaggcggtattacc
gatgggctggtgaagaaccaatacctgattcctgattttatcctgaccaacgacaacggt
aagcttgacctgacgctgaattccaaaaatgcccctgacctgaaggtgagtcgttcgtat
gctgaaatgatggacgcctacgataagagcgataagaaggataaaaaactccgcgatacg
gtgatgtttgtgaagcagaaacttgatgcggccaagtggtttattgatgccattcgccaa
cgacaagaaacgctcctgaacaccatgggctgcattatggttcatcagcatgattttttc
ctgacgggtgatgaggcaaaactcagaccgatgattctgaaagatattgccgataagatt
gaaatggatatctcgacagtttcgcgtgttgccaacagtaaggctattcagacagagttt
ggcattttcccactgaagtatttcttctccgaagggatcacgacagataccggtgaggat
gtttcgagccgtgaggtgaagcatgtactcaaagggatgattgaaaaagaagataaaaag
aaaccgctttctgatgacaagctggagaagctgttgaaagagcgtggttacaaaattgcc
cgacgtacagtggcaaaatatcgggagcagttgaatattcctgttgcacgactccgcaag
cagttgtaa

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