Persicobacter psychrovividus: PEPS_26430
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Entry
PEPS_26430 CDS
T09740
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ppsv
Persicobacter psychrovividus
Pathway
ppsv02020
Two-component system
ppsv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PEPS_26430 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PEPS_26430 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsv03021
]
PEPS_26430 (rpoN)
Transcription machinery [BR:
ppsv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PEPS_26430 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_12
SF3b1
MarR
Motif
Other DBs
NCBI-ProteinID:
BDD00363
UniProt:
A0ABM7VI02
LinkDB
All DBs
Position
complement(3128500..3129948)
Genome browser
AA seq
482 aa
AA seq
DB search
MQKLGLTQSLSQKLSPQQIQFIKLLQVPTAELEARVEEELEANPALEEGRDEADELYAQD
DYEAPESGDEYMDNEISVEEYLHDDFSGYKMYGDGNGDEEDKDIPISSMTTLQEQLKDQL
SFLRLSDHQRLLGEQLIGSIENDGYIRRDLEMIVNDLAFSRNIETSLEELEEVLVQIQSF
DPAGIAARDLQECLLIQLKRRQEPDEATQDAIRIIEESFNDFTKKHYEKIMRRLNIKEED
RLRDAMETIVRLNPKPGGITDGLVKNQYLIPDFILTNDNGKLDLTLNSKNAPDLKVSRSY
AEMMDAYDKSDKKDKKLRDTVMFVKQKLDAAKWFIDAIRQRQETLLNTMGCIMVHQHDFF
LTGDEAKLRPMILKDIADKIEMDISTVSRVANSKAIQTEFGIFPLKYFFSEGITTDTGED
VSSREVKHVLKGMIEKEDKKKPLSDDKLEKLLKERGYKIARRTVAKYREQLNIPVARLRK
QL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattaggactaacgcaatcgttatcacagaagctatctccgcaacaaatccag
tttattaagttgttgcaggtgccgacagcagagctcgaagctcgtgtggaagaggaattg
gaggcgaatccagctttggaagagggtcgcgatgaagccgatgaactttatgcgcaggac
gactatgaagcacctgaaagcggcgacgaatatatggacaatgaaatcagtgtggaggaa
taccttcatgatgatttcagtggttataaaatgtatggcgatggcaatggcgatgaagag
gataaggatatcccgatctcttcgatgaccacccttcaggagcaactgaaagatcagctg
agctttttgaggctttcggatcatcagcggcttttgggcgaacagctcattggcagtata
gaaaatgacggctacattcgtcgtgatctggagatgattgtgaatgatttggccttctca
agaaatatcgaaacctcccttgaagaactcgaggaagttttggtacagattcagtccttt
gaccctgccggcattgcggcgcgggatcttcaggaatgtctgttgattcagcttaaaaga
agacaggagcctgatgaggccacacaggacgccatccgtattattgaagaatccttcaat
gattttaccaaaaagcattacgagaaaattatgcgacggctgaacatcaaggaggaagat
cgccttcgtgatgccatggagaccatcgtgcggttgaatcccaagccaggcggtattacc
gatgggctggtgaagaaccaatacctgattcctgattttatcctgaccaacgacaacggt
aagcttgacctgacgctgaattccaaaaatgcccctgacctgaaggtgagtcgttcgtat
gctgaaatgatggacgcctacgataagagcgataagaaggataaaaaactccgcgatacg
gtgatgtttgtgaagcagaaacttgatgcggccaagtggtttattgatgccattcgccaa
cgacaagaaacgctcctgaacaccatgggctgcattatggttcatcagcatgattttttc
ctgacgggtgatgaggcaaaactcagaccgatgattctgaaagatattgccgataagatt
gaaatggatatctcgacagtttcgcgtgttgccaacagtaaggctattcagacagagttt
ggcattttcccactgaagtatttcttctccgaagggatcacgacagataccggtgaggat
gtttcgagccgtgaggtgaagcatgtactcaaagggatgattgaaaaagaagataaaaag
aaaccgctttctgatgacaagctggagaagctgttgaaagagcgtggttacaaaattgcc
cgacgtacagtggcaaaatatcgggagcagttgaatattcctgttgcacgactccgcaag
cagttgtaa
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integrated database retrieval system