Persicobacter psychrovividus: PEPS_27030
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Entry
PEPS_27030 CDS
T09740
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ppsv
Persicobacter psychrovividus
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsv03400
]
PEPS_27030
Enzymes [BR:
ppsv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PEPS_27030
DNA repair and recombination proteins [BR:
ppsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PEPS_27030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
BDD00423
LinkDB
All DBs
Position
3193920..3195407
Genome browser
AA seq
495 aa
AA seq
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MIETVRLILGDQLNEHHSWFAQTDETVCYVMMEILQETNYEPQHQQKTLATFASMRNFAR
KMRRQGHNFFYLTLTAPENRQSLPENIAWLIYQNKAKNFEYLQPDDKRNARQLKDFAYIL
GVNIQQHQSHHFLLEEGDLSQSIETTTEDIYSYMAVKYRKLIGNIEKNTAENVRLKLPKV
ETPAIKNDLRPILKDIEQFDIPAFGHVNAKSCRWVCSSAQAWQYVNYYFHHLLPQKKSAE
GADAIPSQLAWALNMKMIEPLELLEALSDFTEKYPFAITQQAVNALLKALLGDREYKRFR
FNRQLATEEAINPLGHHKPLPSFFKEGNSTSMRCIQQTIEEVENKGKTSAKRLLMVLKNY
ALLAKVEPDLFEQWVQHKLVNATAWSEQGELLDFIYQPQQRIFKGQEIASNIHDCSKCTF
DPTINHGEKACPFNGLYWRFIHKNKPLLSRKIYGKALEGWETMDLTEKHHTLEFARNLLQ
QYHVATDEKSSLRSF
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaccgttagactgattttgggtgatcagctcaatgagcaccattcgtggttt
gcgcaaaccgacgaaacagtctgttatgtcatgatggaaattttacaggaaaccaactac
gagccacaacatcagcaaaaaacgttggcgacctttgcatcgatgcgaaactttgcccgc
aagatgcgccgtcaggggcataacttcttttacctgacccttaccgcccccgaaaaccga
cagtctttaccggagaatatcgcctggctgatttatcagaacaaggcaaaaaactttgaa
taccttcagcccgacgacaagcggaatgctcgccagctgaaagatttcgcctatattctg
ggggtcaatattcaacagcatcaaagtcaccattttttgttggaagaaggcgacctcagc
cagtctattgaaaccaccactgaagatatttacagctatatggctgttaaataccgtaaa
ctgatcggcaatattgaaaaaaatactgccgaaaatgttcgcctgaaactccccaaggtt
gaaactcctgccataaaaaatgacctccgtcccatcctcaaagatattgagcagtttgat
attcccgctttcgggcatgtgaatgctaaatcttgtcggtgggtatgctcttcggcacaa
gcgtggcaatatgtgaactattattttcatcatttattgccacaaaaaaaatctgccgaa
ggggctgatgctattccttctcagttggcatgggcgctgaatatgaaaatgattgagccg
ctggaactattggaagccctttcagattttaccgaaaaatacccctttgccattactcag
caggccgttaatgcactgctgaaagcactgctcggagatcgggagtataaacgttttcgc
ttcaatcgccagcttgccaccgaagaggcgatcaacccactcggccatcataaacccttg
ccctcctttttcaaagaaggcaacagcacctccatgcgctgcatacagcaaaccatcgag
gaagttgaaaacaaagggaagaccagcgccaaacgcttgctgatggtgctgaaaaattat
gcacttttggcgaaggtcgagcctgatttatttgagcagtgggtgcagcataagctggtt
aatgcgacggcatggagcgaacaaggcgaattactcgattttatttatcagcctcagcaa
cgtattttcaaagggcaggaaatcgcatcgaatattcacgactgcagcaaatgtactttc
gatcccaccatcaatcacggggaaaaagcttgccctttcaatggtttatattggcggttc
attcataaaaacaaacctttactctcccgtaaaatttacggcaaagcactggaaggctgg
gaaaccatggacttaacagaaaagcaccatacccttgaatttgctcgcaacctcttgcag
caataccatgttgctaccgacgaaaaaagctccctgaggagcttctaa
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