Persicobacter psychrovividus: PEPS_27770
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Entry
PEPS_27770 CDS
T09740
Symbol
phrB2
Name
(GenBank) FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppsv
Persicobacter psychrovividus
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsv03400
]
PEPS_27770 (phrB2)
Enzymes [BR:
ppsv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PEPS_27770 (phrB2)
DNA repair and recombination proteins [BR:
ppsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PEPS_27770 (phrB2)
Prokaryotic type
PEPS_27770 (phrB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDD00497
UniProt:
A0ABM7VIA9
LinkDB
All DBs
Position
pPP1:complement(80065..81531)
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AA seq
488 aa
AA seq
DB search
MKPKINLVWIKRDLRTQNHEPLHLAEMQDIPYLIIYNFSPSMVQMPDFDDRHGRFILESI
EEMNTVFAPFKRKIIVAYAEMLDLLKALAPHYQLKTVFSYQETGRQLSWDLDKAVNSYCQ
EHKIHWQESQRDGIVRGLRNRTNWDRLWTKTMEAPLLKNDFKLNEFKMTPNIFDSFQLPD
SMRKKWTSSSHSMQQGGEANGWKYLTSFVEDRAKNYRKHISKPAESRRSCARVSPYLAWG
NLSVAQVYQFVKYHGNNLWYKASFSAFLTRLRWHCHFIQKFEMEINYEHRCINKGFELLQ
WERKNDLIKAWEDGLTGIPMVDACIRCVKATGWINFRMRAMLVSFFCHRLGQDWRWGVDF
LARQFLDYEVGIHFTQFQMQAGTTGINTIRIYNPVKQGQDHDPEGAFIKKWVPELRALSP
AQIHAPWEATPIGLSSVDFKLGTDYPLPAIDLVESAKRNRQKLWQHRKHPLVKEEAQRLL
QKHVRPKK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctaaaattaaccttgtctggataaaacgtgatttacgcacgcaaaatcatgag
ccgctgcatttggctgaaatgcaggatatcccctacctgatcatttacaacttttcgccc
tcaatggtgcaaatgcccgactttgatgatcgacatggccgttttattttggagtcgatt
gaagagatgaatacggttttcgcccctttcaagcgaaagattatcgtggcctatgctgaa
atgctggacttgctgaaggcacttgctccacactaccaactgaaaaccgttttcagctat
caggaaactggtcgtcagttaagttgggatctggataaagcggtcaattcctattgccag
gagcacaaaatccattggcaggaatctcaacgcgacggcattgttcgtggactccgaaac
cgtacaaactgggatcggctatggacaaaaaccatggaagcgcctctcctaaagaatgat
ttcaagctgaatgaattcaaaatgacacctaacattttcgacagcttccagctccctgac
tcaatgcgtaaaaaatggacttcttcctcccacagcatgcagcaaggcggagaggccaat
ggatggaaatatttgacctcctttgtggaagatcgtgccaaaaattaccgaaaacacatc
tccaagcctgcggagagtaggcgatcatgcgcgcgcgtgtcgccctatttggcatggggg
aatttatccgtggcacaggtgtaccagtttgtgaaatatcatggtaataatctgtggtac
aaagccagcttttcggctttcctgaccaggcttcgctggcactgtcattttattcagaag
tttgaaatggaaatcaattatgaacaccgctgcattaataaaggctttgagctcttgcaa
tgggagcgcaagaacgacctcataaaagcatgggaagatggactgacgggcattccgatg
gtggacgcctgcattcgctgtgttaaagctactggctggatcaatttcagaatgcgtgcc
atgctcgtttcattcttttgccatcggttaggtcaggactggcgctggggggtggatttt
cttgcccgacagttccttgattatgaggtcggcattcattttacccaatttcagatgcag
gcaggcaccacaggaattaacaccattcgtatttacaaccctgtaaaacaagggcaggat
cacgaccccgagggagcattcatcaaaaaatgggtgccagaattgagagccctcagtccg
gcacaaattcatgctccctgggaagccacaccgatcggtctgtcgtcagtagattttaaa
ttagggactgattacccactgccggctattgacctggtagaaagtgccaaacgaaatcgt
cagaaattatggcaacaccgaaagcaccctttggtaaaagaagaagcacagcggctactg
caaaagcatgtacgtcctaaaaaataa
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