Persicobacter psychrovividus: PEPS_29810
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Entry
PEPS_29810 CDS
T09740
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ppsv
Persicobacter psychrovividus
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsv03400
]
PEPS_29810
Enzymes [BR:
ppsv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PEPS_29810
DNA repair and recombination proteins [BR:
ppsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PEPS_29810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
HSP90
TFA2_Winged_2
Motif
Other DBs
NCBI-ProteinID:
BDD00701
LinkDB
All DBs
Position
pPP1:complement(386387..387886)
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AA seq
499 aa
AA seq
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MSMKTYAIVFPHQLFEESPLLQECTNFILVEEYLFFRQYRFHQQKLVFHRASMKFYEDYL
KKQSKGVQYIEATDSLSDVRQLVQHLKNEGIAALHYIDPVDDWLSSRFNKYAERASMKLT
KYESPGFLTSEQDIEAFFAKEKKRYLHHDFYQQQRKRMNILMTDAGEPEGGQWSFDEKNR
KKYPKGKTPPVIHYPPSDQYHQEALTYVRNNFDHEPKVMTDKALYPNTFWDSKNWWKQFL
DFRFAEFGPYEDAIVEEADILHHSVITPMLNVGLLTPAYIVQSVIEYGRDNGVRLSTVEG
FIRQVIGWREFIRGMYVHHGRQMRTTNFWGFEKKLPSALYHGATGIPPVDETIKKLLKTG
YLHHIERLMILGNFMLLCEYAPSQIYRWFMELSVDGYDWVMVPNVYGMSQFADGGLMATK
PYISSSNYIKKMSDYEGGVWEETWDALFWRFMYVHRDYFENNPRMKMLLWNLDKKSEEER
NEHIHRAEDFINHLNSHKY
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaaaacttacgccatcgtttttccgcatcagttatttgaagagtcgcccctg
ctgcaggagtgcaccaactttattctggtggaagagtacttgtttttcagacaataccga
ttccatcagcagaaactggtttttcatcgggcaagcatgaagttttatgaagattacctg
aaaaagcaatccaaaggggtgcagtatattgaggccacagactccctgagcgatgtccga
cagctggtgcagcacctcaaaaatgagggaatcgccgctttgcattatattgatcctgta
gatgactggctatcgtcacggttcaacaaatatgctgaacgggcttccatgaaactgacc
aaatatgaatcgccaggtttccttacttccgagcaggatattgaggcctttttcgccaag
gagaaaaagcggtatctgcaccacgacttttatcagcaacagcgcaagcggatgaacatc
ctgatgacagatgcaggagaacccgaaggggggcagtggagcttcgatgagaaaaaccga
aagaaatatcccaagggtaaaacgcctcccgtgattcattatccgccgagtgatcagtac
catcaggaggcgctgacttatgtcagaaataattttgaccatgagccgaaagtcatgacc
gacaaggccctctatccgaatactttctgggacagtaagaactggtggaaacagtttctg
gactttcgttttgcggagtttggtccttatgaggacgctattgttgaagaggctgatatt
ttgcaccattccgtgattacaccgatgcttaacgtggggctgctcacccctgcctacatt
gtgcagtcggtgattgaatatgggcgtgacaatggcgtcaggctgtccaccgttgaggga
tttattcggcaggtgatcggctggcgggagtttattcgggggatgtatgtgcaccatggc
cgacagatgcgcaccaccaacttttggggctttgaaaagaagcttccctcagcactctac
catggggctacggggattcctcccgtggatgaaacgatcaagaaattactcaaaacaggt
tacctgcaccatattgaacgcctgatgatcttaggcaattttatgttgctgtgtgagtat
gcccccagccaaatttatcgctggtttatggaactttctgtagatggctatgattgggtg
atggtgcccaatgtgtatggcatgagccagtttgctgacggtggactgatggcgaccaag
ccttatatcagcagcagtaattacatcaaaaaaatgagcgactacgaagggggagtatgg
gaggaaacctgggatgccctgttttggcgattcatgtatgtgcaccgcgattattttgaa
aataaccccaggatgaaaatgcttctgtggaatctggacaaaaaatctgaagaagagcgc
aacgaacacatccaccgtgcggaagattttatcaaccatctgaatagccataagtattga
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