Persicobacter psychrovividus: PEPS_33380
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Entry
PEPS_33380 CDS
T09740
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppsv
Persicobacter psychrovividus
Pathway
ppsv03030
DNA replication
ppsv03430
Mismatch repair
ppsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PEPS_33380
03430 Mismatch repair
PEPS_33380
03440 Homologous recombination
PEPS_33380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsv03032
]
PEPS_33380
03400 DNA repair and recombination proteins [BR:
ppsv03400
]
PEPS_33380
Enzymes [BR:
ppsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PEPS_33380
DNA replication proteins [BR:
ppsv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PEPS_33380
DNA repair and recombination proteins [BR:
ppsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PEPS_33380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
BDD01058
LinkDB
All DBs
Position
pPP1:complement(923153..926035)
Genome browser
AA seq
960 aa
AA seq
DB search
MLVQELKAKGYTSFVLTDINNTSAVFEVYREALKQGLKMNVGIEFRRNGQWQYTAVAKSA
TGFRIINEHLTAHQHCNSFPPLFHEEVLVIFPMNNLPERALTANEFISFPPEQVHRWPSL
KHLHPYREHLLMGLPITFSAPKDRQLHRLLCAIDQNVLLSKLDKSRIATTSAFPIPKKDY
IEYYASMPDVVQQSQELLSMCTLHFDLEKPRNKRFYTCSDKDDMALLRKLTYDGFAYRYS
KNDRYARARVEKELRVIEQLKMGAYFLITWDMLRYAGNCGFYHVGRGSGANSIVAYCLKI
TDVDPVELNLYFERFINPYRSSPPDFDIDFSWDERDQILDYLFKRYGKDHVALMACYNTF
KAKSLIRELGKVFGLPKGDIDCMIDEPNKPKKHHEMARKIYRYAHRLQGIPNHLSIHAGG
VLISEAPITCCTPLLQMPKGFPIVHFDMHVAEDIGYYKFDVLSQRGLGHIKECVKLVQEN
LGVSIDVHDIQSFKKDERIKHNLKIGKTIGCFYIESPAMRQLLQKLSCDNYVSLVAASSI
IRPGVAKSGMMKTYIERAHHPEKVQYLHPVFEEHLGETYGVMVYQEDVIKIAHHFAGISL
DEADILRRAMSGKTRSKTAFQELQDQFFANCQARGHARALSEEVWRQMESFSGYSFCKAH
SASFAVESYQSLFLKTYYPLEFMVAVINNFGGFYFAELYLHEARLAGANIHAPCINRSSW
LTSIRQKDIYIGFVHIKSINQKLIQEIITEREQKGPFRSLADFTSRVAIGREQLELLIRI
DAFRFTGHSPQQLQWKKGLCLRPNKPKVATGLLFASEMAQEQKYELPTLEQEGNEGFFEQ
LDLLGFPLSSPFDILRTSFRGDFPAIDLVKYQGQTVRMLGYYITRKPVRTVKGEIMNFGS
FIDAWGYFFDSCHFPPSLQHSPFQGRGCYLIKGKVVVEFGFPTVEVEKMVKLPQKADPRY
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgctggtacaggaacttaaggccaagggctacacctcttttgtgctcaccgatatcaac
aatacttcagcggtttttgaggtatatcgggaagccctgaaacaagggctgaaaatgaat
gtcggtatagaattccgccgtaacggacagtggcaatatactgccgtcgcgaaatcggcc
acgggtttccggattatcaacgaacacctcaccgcccaccagcactgcaactcattcccc
ccattatttcatgaggaggtactggtcattttcccgatgaataacctgcccgaacgcgcg
ctcacggccaatgaatttatcagctttccgccagagcaagtccatcgatggccaagcctt
aaacatctgcatccctaccgagaacatttactgatggggctgcccattactttctcggca
ccgaaagaccgtcagcttcaccgcctgctttgcgccattgatcagaatgtgctgctaagc
aaacttgacaaaagccgaattgccacaacttcagcatttccaataccgaaaaaagactat
attgaatactatgcaagcatgcctgatgtggtacagcaaagtcaggaattattgtcgatg
tgtacccttcattttgatttagaaaaacctcgcaacaaacggttttatacttgctccgac
aaagacgacatggccctgttgcggaaactgacctatgatggttttgcttatcggtattca
aaaaacgaccgctatgcccgtgcccgtgtagagaaagaactgcgggtaatcgaacagctg
aaaatgggcgcttatttccttattacctgggacatgcttcgctatgcagggaattgtggt
ttttatcatgtagggcgaggatcgggggcaaactcgatcgttgcttactgcctgaaaatt
accgatgttgatcctgtggaactgaatttatatttcgaacggtttattaacccctatcgg
agttcaccgccagattttgatattgatttcagctgggacgaaagggatcagatacttgac
tatctttttaaaaggtacggcaaagaccatgtcgcactgatggcctgctacaatactttt
aaggcaaaatcgctaatcagggaattaggaaaggtttttggcctgccaaaaggggatatc
gactgtatgattgatgaacccaacaagcctaaaaagcatcatgaaatggctcggaaaatt
taccggtatgcccaccggcttcagggaatccccaaccacctttccatacatgctggtggg
gtactgatttcagaagcacccattacttgctgtacgccattgctccagatgccaaagggt
tttcctattgttcatttcgacatgcatgtggcggaagatatcggatattataagtttgat
gtcctcagccaaagggggcttgggcatatcaaagaatgtgtaaagctggtgcaggaaaat
ctgggggtgagtattgatgttcatgacattcaatcctttaaaaaggatgaacggattaag
cataacctgaaaattggcaaaacgattggttgcttttatattgaatcgcctgcgatgcgc
caattgctgcaaaaattatcttgcgataattatgtgtcgcttgttgctgcctcgtcaatc
attcggccaggggttgcaaaaagtggcatgatgaaaacctatattgaacgggcacaccat
cctgagaaagtgcaatatttacaccctgtgtttgaggagcaccttggagaaacctatggc
gtgatggtctatcaggaagatgtgatcaagattgcccatcattttgcggggatttccctt
gatgaagccgatattttacgtcgtgcaatgagcggaaagacaagaagcaaaacggccttt
caggaacttcaagatcagttttttgccaattgccaggcacgagggcatgctcgggcgctt
tctgaagaagtctggcgacagatggaaagcttttcgggctactctttctgcaaagcgcat
tcggcgagttttgcagtagaaagttaccaaagcctttttctgaaaacttactatccgctg
gagtttatggtggcggtgatcaataattttggaggattttattttgcggaactttacctg
cacgaagcccgacttgcaggggcgaatattcacgcgccctgtattaatcggagttcatgg
ctgaccagtattcggcaaaaggatatttacatcggctttgtgcatatcaagagcatcaat
caaaaactcattcaggaaataataacggagcgggagcaaaaagggcctttcaggagcctc
gcggattttaccagccgagttgccattggccgtgaacaactggagttgctcatcaggatt
gacgcctttcgctttacgggccacagccctcagcaattacagtggaaaaaagggctttgt
ctgcgccccaacaaacccaaagtggcaacaggacttttgtttgcctcggaaatggcacaa
gagcaaaaatatgagttgcccacacttgagcaggaaggcaatgagggcttttttgaacag
cttgatctgctgggcttccccctctcaagcccttttgatattttgcgcacttcctttcgc
ggagacttccctgctattgacctggttaaatatcaggggcagacggtcaggatgcttggc
tattacatcacgcgaaaacctgtgcgcacggtaaagggagagatcatgaattttggctct
tttattgatgcctgggggtatttttttgatagttgccactttcccccaagtcttcagcat
agtccttttcaggggcggggttgttatttgatcaagggaaaagtcgtggttgagtttgga
ttcccaaccgtggaggtggaaaagatggtgaagctaccgcaaaaggcggacccaaggtat
tga
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