KEGG   Persicobacter psychrovividus: PEPS_40020
Entry
PEPS_40020        CDS       T09740                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ppsv  Persicobacter psychrovividus
Pathway
ppsv03030  DNA replication
ppsv03430  Mismatch repair
ppsv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PEPS_40020
   03430 Mismatch repair
    PEPS_40020
   03440 Homologous recombination
    PEPS_40020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsv03032]
    PEPS_40020
   03400 DNA repair and recombination proteins [BR:ppsv03400]
    PEPS_40020
Enzymes [BR:ppsv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PEPS_40020
DNA replication proteins [BR:ppsv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PEPS_40020
DNA repair and recombination proteins [BR:ppsv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PEPS_40020
SSDB
Motif
Pfam: RNase_T BRCT Rv2179c-like
Other DBs
NCBI-ProteinID: BDD01722
UniProt: A0ABM7VL35
LinkDB
Position
pPP3:complement(258328..259233)
AA seq 301 aa
MRFLAIDFETANSSRNSACSVGVALFEEGKLIQSGHYYIKPEPNYFAPINIGVHGIYLEM
VEHALDFKSIWEEIMVDYAAEIMVCHNAGFDMSVIRSSFDALGLPYPQVNYACTLQLAKK
LHPQLPHHKLNLLCQCYDIPLNHHNAESDAVACGLLMTHFMHHFSTQSPEDLYLQLDGSM
GTLHSNAYERPYIGYAPQIPLLYQSPTEKKAKEESPLTGKRVAFTGSLNNFSRSEAQKLT
EQVGGIAFPANVSRYTHYLVSNNPQSRSTKIQKAQQLQSQCHPIQIIDEETFTQYVLEEC
D
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagatttctcgccatagactttgaaaccgctaacagtagccgaaatagtgcttgctcc
gttggggtagcattatttgaagaaggcaaactgattcagagtgggcattattatatcaag
cctgaacccaattactttgccccaataaacattggtgttcatggcatttatcttgaaatg
gtagagcatgccctggatttcaaaagtatttgggaagaaattatggtggattacgccgca
gaaattatggtttgccataatgcaggctttgatatgagcgttattcgttcttcctttgat
gctcttggcctaccttatccacaggtaaattacgcctgtacccttcagttggcaaaaaaa
ctgcaccctcaattaccccatcataaattgaacctgctttgccagtgttatgatatccca
ttgaatcaccacaatgcagaaagtgacgccgtcgcctgtgggttattgatgacccatttt
atgcatcactttagcacccaaagtcctgaagacctatatttgcaattagatggtagtatg
ggcaccttacattccaatgcttacgaaagaccatacattggatatgcgcctcagattcct
ttactttatcaatcgcctacagaaaaaaaagccaaagaggaaagtccgcttacgggcaaa
cgggtagccttcacgggcagtctgaataatttcagccgttcggaagcacaaaaactgacg
gaacaagtaggcggaattgcttttcctgccaatgtaagccgttatacacattaccttgtt
tccaacaacccacagagccgaagtaccaaaatccaaaaagcccaacagttacaaagtcag
tgtcatcctattcaaataattgatgaggaaacttttactcaatatgtgctggaggaatgc
gattag

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