Persicobacter psychrovividus: PEPS_40140
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Entry
PEPS_40140 CDS
T09740
Symbol
rlmF
Name
(GenBank) ribosomal RNA large subunit methyltransferase F
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
ppsv
Persicobacter psychrovividus
Brite
KEGG Orthology (KO) [BR:
ppsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsv03009
]
PEPS_40140 (rlmF)
Enzymes [BR:
ppsv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
PEPS_40140 (rlmF)
Ribosome biogenesis [BR:
ppsv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PEPS_40140 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Motif
Other DBs
NCBI-ProteinID:
BDD01734
LinkDB
All DBs
Position
pPP3:277759..278730
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AA seq
323 aa
AA seq
DB search
MMQNKKKSKNGVVELPPHHPSNPHKDGYDFDLLEEKDPSLSKYVITKQNGLKTINFSDDL
SVRALNSALIKAHYEISDWNIPRNNLVPPVPGRADYVLYLADLLSECNEGVIPTDKVKGV
DIGTGASLIYPIIGRKLFQWSFVASEQSQASIQHGLSILKANDLGPSAIKLVHQKAIKQY
FKGVIREGECYDFTMCNPPFYSSEAEAEKANIQKWQKLHRDKPVLPKRNFSGQDAELWVP
GGELLFVKFMIKESLNHKDQVLWFSALVSQKDHIFDLKKQLKKVGVADFREIKMMQGQKR
TRFLAWTFQDEQARKDWAAKNWK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaataagaaaaaatcgaaaaatggtgtggtagaattgccacctcaccatcct
tcgaacccccataaagatggttatgattttgaccttttggaggaaaaagatccttcgttg
tcaaaatatgtgattaccaaacaaaatggtttgaagaccattaatttcagcgatgatttg
tcggtaagagctttaaacagcgcactgatcaaggcgcactacgagatcagtgactggaat
attcctcgcaataatttggtgccacctgtaccaggccgtgccgattatgtattgtatctg
gccgatttgttgtcagaatgcaacgaaggagtgattcctactgataaagttaagggcgtt
gatattggaactggcgcaagtttgatttacccgatcattggccgaaagttgtttcagtgg
tcatttgttgcttcagaacaaagtcaggcctctattcagcatgggttaagtatcttgaag
gcgaacgaccttggtccttctgcaatcaaattagtgcatcaaaaagcaattaagcagtat
ttcaaaggggtgatccgtgaaggggagtgttacgatttcaccatgtgtaatcctcctttt
tacagttcagaggcggaagcagaaaaggccaatattcaaaagtggcagaagcttcatcgt
gataagcccgttttacccaaaaggaatttcagtggtcaggatgccgaactttgggtacct
ggaggtgagttgctttttgtgaaattcatgattaaggaaagcttaaaccataaagatcaa
gtgctgtggttcagtgcattggtgtcgcaaaaagaccatatttttgaccttaaaaagcag
ttgaaaaaagtgggtgtggcagattttagagaaataaaaatgatgcaagggcagaagcgt
acccgctttttagcctggactttccaagatgagcaggctcgtaaggattgggcagcgaaa
aactggaaatag
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