Pseudomonas versuta: AOC04_00140
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Entry
AOC04_00140 CDS
T04081
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy03030
DNA replication
ppsy03430
Mismatch repair
ppsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOC04_00140
03430 Mismatch repair
AOC04_00140
03440 Homologous recombination
AOC04_00140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsy03032
]
AOC04_00140
03400 DNA repair and recombination proteins [BR:
ppsy03400
]
AOC04_00140
Enzymes [BR:
ppsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOC04_00140
DNA replication proteins [BR:
ppsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOC04_00140
DNA repair and recombination proteins [BR:
ppsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOC04_00140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF1059
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ALE86726
UniProt:
A0A0M4RDU0
LinkDB
All DBs
Position
28747..29358
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AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPSSTCRATEIAVVILEQGRIVERYQSLMNAGVRVPGFIEQLTGIS
NAMLRTAPSAQQVMNEVNEFVGITPLLAHNAAFDQKFWDFEMGLIKRTRLQHFACSLLLA
RRLMPAAPNHKLGTLTTFAQLPHTGQAHRAMADAEMAANLTTHLAEQLRQKHGLRELNHD
LLRSLQKIPAAKINEHLKRCRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcatcgccgtaattgactttgaaaccactggtatctccccgagcagcacgtgt
cgggcgacagaaattgcggtggtgattctggagcaggggcgcattgtcgagcgttaccag
agcctaatgaacgcgggcgtgcgggtaccgggttttatcgagcaattgacaggcatcagc
aacgccatgttgcgcactgcaccgtctgcacagcaggtgatgaacgaggtcaacgagttt
gtgggtatcacgcccctgctggcgcacaacgcagccttcgaccaaaaattctgggatttc
gagatggggctcatcaagcgcacccgtctgcaacactttgcctgctccttgctgctggcg
cggcgtttgatgccggcggcgcccaatcacaaactgggcaccctcaccaccttcgcccaa
ttgccccatacaggtcaggctcaccgggccatggccgatgctgaaatggcagccaacctg
acgacccacctggctgagcaactgcgtcaaaagcacggcctgcgagagttgaaccacgat
ctgttgcgcagcctgcaaaaaattcctgccgccaaaatcaacgaacacctcaagcgctgc
cgcgggttctga
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