Pseudomonas versuta: AOC04_00315
Help
Entry
AOC04_00315 CDS
T04081
Name
(GenBank) diguanylate phosphodiesterase
Organism
ppsy
Pseudomonas versuta
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
Motif
Other DBs
NCBI-ProteinID:
ALE90936
LinkDB
All DBs
Position
complement(66031..69903)
Genome browser
AA seq
1290 aa
AA seq
DB search
MPNVTPPTLTRIPGQFLGTPVRGTLKGALATLVLILLAMLFWLLVEQFRHTIQQERLSSI
NYSADLADNINLSMALRAETALNQLPTYAQPKAPHQLQELLTRLRQSLPALQSLALLSAT
GQVLLDSTGVSPDAAYLADWIKSTRLHKRTAGYYYSNNSDGTVAYLMLRHPGGTTNGYWL
LRMNPDLLQDLARNTVNNRPRWLIENTQTGRTLSRSAPPLAPVSAVDPQDVDDTVLLTPL
SNSDWQLRGLFNDRLAAEHLLPGLIGKSLLGLLFSMLPVVALFNMRRRQRQLHEGRRRYH
DIFEGTGVALCVLDLSSLPGFLEREKIRDSHTLKQWLNNQPHHPHQLLEQLRITEVNQVA
MQLLEVESEDGAWLKLISDCPQTGPAIGYPLVEAVLDQLQQLELEIKLADARGQDLHLWL
VLRLPDTRQDYHAVILSITDITNRKLIELSLQERESFWSDVVRTVPDHLYVQDVISQMMI
FSNYHLGHTLGYNACELQQMGPYFWEFLLHPDDAEHYHQLRLQQRDGEYLHRLQCQLRFR
HRNGAWRSFEIREQALALGTGDQVTRIVGVAKDITDQIEASESLRDSEQRYRMLAESISD
VIFSTDRLLRLNYVSPSIQTVLGYDAAWVFDNGWQSTIANPQQLANISSLLERVTAALDN
PEQLTALRSQLQSQLFLLDCLRADGRKIPMELRLVLVWDENDTFEGILGVGRDISQQRRA
EKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVAQVLDQLPSMLTVDEQQQ
AHLRYVIKQLNQHSSWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERK
ASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQQGDRNKSWVVLMFLDLDRFKPINDSLG
HAAGDRMLKDMAIRLLACVDDDDTVARMGGDEFTLLLQPRTTRQLALNRAISVAEQILAS
LVQPFVLESREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMN
ASALERLELESDLRHALEQEEFILFYQPQFSGDGKRLTGVEALLRWNHPRRGLVPPGDFI
PVLEELGLVVDVGDWVLTEACRQLKHWHQAKVRVPKVSVNISARQFSDGQLGTRIANILK
DTGLPPACLELELTESILMREVSEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPID
VLKIDRTFVDGLPCGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQG
YLLGRPMPARQLEKLLLAKQMHAASDELHI
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaatgtcaccccgccaacactgacccgcataccaggccaattccttggcacacct
gtgcgcggcacgttaaaaggcgcgctggccacgctggtcctgatactgctggcaatgctg
ttctggctattggttgaacagttccggcacacgatccagcaggagcgcttatcgagtatc
aattacagcgcagacctggccgacaatatcaatctgagcatggcgctcagggctgaaacg
gccctcaaccagctacccacctacgcgcaacccaaagccccgcaccagctacaggaactg
ctcacccggctgcgccaatccttgccggccctgcaaagcctggccttgttgagcgccacc
ggccaagtgctgctcgacagtacgggggtcagtcccgacgccgcctaccttgccgactgg
ataaaaagcacccggttgcacaagcgcacagccggctactattacagcaacaacagtgat
ggcactgttgcctatctgatgttgcgccaccctggcggtacgaccaacggttactggttg
ctgcgcatgaatccggatctgctacaagacctggcacgcaataccgtcaacaaccgcccc
cgatggctgatcgaaaacacacagaccggcagaacgctgagccgcagcgccccccctctt
gctccggtatcggccgtcgatcctcaggacgtcgatgacacagtactgctgactcccttg
agcaacagcgactggcagttgcgcgggctgttcaatgacaggctggcggctgagcacttg
ctccccggactgattggcaaaagtctgctcggcttgttgttttccatgctgccggtggtc
gccctgttcaatatgcgccgccgccaacgccaactgcacgaagggcgccgtcgttatcac
gatattttcgaaggcaccggagttgccctctgcgtactcgacttgtccagcttgccgggg
tttctcgagcgcgaaaaaattcgcgacagccacacgctcaagcaatggctgaacaaccag
ccgcatcaccctcaccagttacttgaacaattgcgcatcactgaagtgaaccaggtcgcc
atgcaattgctggaggtcgaatcagaggacggcgcgtggttaaaactgatcagcgactgt
ccgcaaaccggcccggccatcggttatccgttggtagaggcggtactcgaccaactgcag
cagcttgagctggaaatcaaactggccgacgcccgggggcaagacctgcatttatggctg
gtgctgcgcctgcccgatactcgccaggactatcacgcggtcatcctgagcattaccgac
attaccaatcgcaagctgatcgagctgtccttgcaggaacgcgaaagcttctggtccgac
gtggtacgtaccgtaccggaccacctctatgtgcaggatgtcatcagccagatgatgatt
ttcagcaactatcacctgggccacaccctgggctataacgcctgcgagttgcagcaaatg
gggccgtatttctgggagttcctgctgcatcccgacgacgcagagcactatcaccaacta
cgcctgcagcaacgtgacggcgagtatctgcatcggctgcaatgccagctgcgctttcgt
catcgcaatggcgcctggcgcagttttgaaatccgcgaacaggcgctggcccttggaaca
ggggaccaggtcacgcgaattgtcggggttgccaaagatattacggaccagatcgaagcc
agcgaatcgctgcgcgacagcgagcagcgctaccggatgctggctgagagcatcagcgat
gtcattttctcaactgaccgtttactgcgcctgaattatgtcagcccttccatacagacc
gtgctcggctacgacgcggcctgggttttcgacaatggctggcaatcgaccatcgccaac
ccgcaacagcttgccaatatctccagcctgctggagcgggtcactgccgcactggacaac
cccgagcaactgacggctctgcgcagccaactacaaagccagttattcctgctcgactgt
ttgcgggccgacggacgcaaaatccccatggagttgcgtctggtactggtgtgggatgag
aacgatacgtttgaaggcatcctgggggtgggccgcgacatcagtcagcagcgccgcgcg
gaaaaagacctgcgcatggccgccacagtattcgaacactccacctcggcaatcctgata
accgaccctgccggctatatcgttcaagccaacgaagccttcagccgggtcagcggctat
gccgtggcgcaagtgctcgaccaattgccaagcatgctaacggtggatgaacagcagcag
gcgcatctgcgttacgtgatcaagcagctcaatcagcacagttcctgggaaggtgaggtg
tggctcaagcgccgcaacggcgaacactacccagcgtgggtcgggattaccgcagtgctg
gacgatgaaggcgatctggccagctatgtgtgttttttcagtgacatcagcgaacgcaaa
gccagtgaacagcgcatccaccggctggcttattacgatgccctgacccacctgcccaac
cgcacattgttccaggaccgcttgcacaccgcactgcaacagggcgaccggaacaaatcg
tgggtggtgttaatgttcctcgacctcgaccgcttcaaaccgatcaatgactccttgggc
cacgccgcaggcgatcgcatgctcaaagacatggcgatccgcctgctggcctgtgttgac
gacgacgataccgtcgcgcgcatgggcggtgatgagttcaccttgctcctgcaaccccgc
accacacgtcaattggccctgaaccgggccatcagcgtggccgaacaaatccttgccagc
ctggtacaaccctttgtcctcgaaagccgtgagttcttcgtcacggccagtatcggtatt
gccctgagcccgcaagatggcaacgaactcagtcagttgatgaagaacgctgacacggcg
atgtaccacgccaaagagcgcggcaagaataacttccagttctatcaggccgacatgaac
gccagcgccctggagcgtctggagctggaaagcgatttgcgccatgcactggagcaggaa
gagttcatcctcttttaccagccccagttcagcggcgacggcaagcgcctgaccggggtt
gaagcgctattgcgctggaatcacccgcgccgcgggctggtgccgccgggcgactttatc
ccggtgctcgaagaactggggctggtggtcgatgtcggggactgggtcctgaccgaggcc
tgccgccagctcaaacactggcatcaggccaaagtgcgcgtacccaaagtgtcggtcaat
atttcggcgcgccagttttcggacggccagctgggtacgcggattgccaatatcctcaag
gacaccgggttgcccccggcctgcctggagctcgaactgaccgaaagtatcctgatgcgt
gaagtcagcgaagccctgcaaattctggccagcctcaaaaatctcggcctgagtattgcc
gtcgacgacttcggcaccgggtattcctcgctcaactacctcaagcaattcccgatcgac
gtgttgaagatcgaccgtacctttgtcgacggtctgccctgcggcgagcaggacgcccag
atcgcccgggccattattgcgatggcccacagcctgaacctggcggtcatcgccgaaggc
gtcgagacccacgaacagctggacttcctgcgcgagcatggctgcgacgaagtccagggc
tatctgctgggacgaccgatgccggcacgtcagttagagaagctgctgctggccaagcag
atgcacgcggcaagtgacgagttacacatttga
DBGET
integrated database retrieval system
