Pseudomonas versuta: AOC04_02045
Help
Entry
AOC04_02045 CDS
T04081
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ppsy
Pseudomonas versuta
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsy03021
]
AOC04_02045
Transcription machinery [BR:
ppsy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AOC04_02045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
ALE87079
UniProt:
A0A0M3UDA3
LinkDB
All DBs
Position
complement(439484..442330)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGETRQYSLRNAPLTRVRFSPG
DTIIHFEGWKMTVREVDDADGLMVYHGLNEQNEPVTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYHTLEHTSRQLQSPLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLIVVPENLQHQWLVEMRRRFNLEVALFDEERFIESDA
SNPFEDTQLALVALEWLVDDTKAQDALFAADWDLLVVDEAHHLVWHEDQVSPEYALIEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESENYRPVAQAVQELLDK
GRLSPEAHKTIHGFLGAEGDTLLAAVNDGDAQASARLVRELLDRHGTGRVLFRNTRAAIQ
GFPERKLHAYPLPCPDEYLELPLGEHAELYPEVSFQAQPDASEEERWWRFDPRVEWLTDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIEVHVPYLETSP
QQRLFQWYHEALNAFLNTCPTGNALQHKFGPRLLPLLEAADDEEWQTLIDEARAERERLE
QELHTGRDRLLELNSGGSGEGEALVEAILEQDDQFTLPIYMETLFNAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELIYVSEVVAPRALQLGRYLPPAALRCLLDANGNDLSSRVAF
ETLNEQLESVPRASANKFIQAQRDNLTPKINAGEAKIAPRHAERVAEAQRRLAADTEEEL
ARLTALQAVNPSVRDSELVALRKQREQSLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagcagagctaggt
ttaggcaccgttctggcacaggacggtcgcttgttaaccgtgctctatccggccactggc
gaaactcgccaatattcgctgcgcaacgcaccgctcacgcgcgtacggttctcgccgggt
gacaccatcatccacttcgaaggctggaagatgacggttcgcgaagtcgacgatgccgac
ggcctgatggtttaccacgggcttaacgagcaaaacgagcctgtaaccctgccagaaacc
cagctatcgaacttcatccagttccgcctggccagtgaccgtctgttcgcgggtcagatc
gacccgctgtcctggttctcgttgcgttatcacaccctcgaacacaccagccgccagctg
caatcgccactatggggtttgggcggcgttcgggcgcaacccattgcccaccaattgcac
attgcccgcgaagtggccgaccgtatcgcgccacgggtcttgctggctgacgaagtaggt
ttgggtaaaaccatcgaagccggcctggtgattcaccgccaattgctcagcggccgcgcc
agccgcgtactgatcgtggtgccggagaacctgcagcaccaatggctggtagagatgcgc
cggcgtttcaaccttgaagtcgcactgtttgacgaagagcgcttcatcgaaagcgatgcc
agcaacccgtttgaagatacccaactggcgctggttgcgctggaatggctggtagacgac
accaaggctcaagacgcgctgtttgcagcagattgggacttgctggtggtcgacgaagcg
catcacctggtgtggcacgaagatcaggttagccctgaatacgccttgattgagcagctt
gcagaagtgatcccgggcgtactgctgctgactgcaactccggaacaactgggccaggac
agccacttcgcccgtttgcgcctgctcgaccccaaccgcttccacgatctggccgccttc
cgcgccgagagcgagaactaccgtccggttgctcaggcggtacaggagctgctggacaaa
ggccgcctgtcaccagaagcgcacaaaaccattcacggcttcctcggcgccgagggtgat
accttgctggccgccgttaacgacggtgatgctcaagccagcgcacgtctggtacgcgaa
ctgctcgaccgccatggcaccggccgcgtactgttccgtaacacccgcgcagccattcag
ggcttcccggagcgcaagctgcatgcctacccgctgccgtgcccggacgaataccttgag
ctgccactgggcgaacatgccgagctctaccccgaagtcagcttccaggcccagccggac
gctagcgaagaagaacgctggtggcgctttgacccccgggtcgagtggcttaccgacaca
ctgaagatgctcaaacgcacgaaagtgctggtgatctgtgcccacgctgagaccgctatg
gatctggaagacgcccttcgcgtacgttccggcattcctgcaacggtcttccacgaaggc
atgaatattctcgagcgcgatcgtgcagcagcctacttcgctgatgaagagttcggtgcc
caggtgctgatctgctcggaaatcggcagtgaaggtcgcaacttccagtttgctcatcat
ttggtgctgttcgatctgccgtcccacccggacttgctcgaacagcggatcggtcgtctg
gaccggatcggccagaagcacgttatcgaagtccatgtgccgtaccttgagaccagcccg
caacagcgcctgttccagtggtaccacgaagcgctgaacgccttcctcaatacctgcccg
accggcaacgcactgcaacacaagtttggtccacgcctgctaccgttgcttgaagcagcg
gacgatgaagagtggcagacattgatcgacgaggcccgtgccgagcgtgaacgtctcgag
caggaactgcacacaggccgcgaccgtttgctagagctgaactccggtggttcgggcgaa
ggcgaagcactggtcgaagcgatccttgaacaagatgatcaattcaccttgccgatctac
atggaaaccctgttcaacgcctttggcatcgacagcgaagaccattcggaaaacgctttg
atcctcaaacctagcgagaaaatgctcgacgccagcttcccgcttggcgacgacgaaggc
gtgaccatcacctacgaccgcaaccaggcgctgtcgcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcaaggcggcatggatctggttttgtcggggtcgatgggcaac
accgcggtcgcactgattaaaaacaaggcactcaagcccgggaccgtactgctcgagctg
atttacgtcagcgaagtggttgccccgcgggcgctgcaattgggccgttacctgccgcct
gccgccctgcgctgcctgctcgatgccaacggcaacgacctgtcatcacgggtggctttc
gaaaccctgaacgaacagctggaaagcgtgcctcgcgccagcgccaacaagttcattcag
gcgcagcgtgacaacctcacgccgaagatcaacgccggtgaagccaagattgcgccacgc
cacgcagaacgtgtggccgaagcacagcgccgcctggccgccgacacggaagaagaactg
gcacgcctgactgctctgcaagcagttaacccgagcgtgcgtgacagcgaactggttgcc
ttgcgcaagcaacgcgaacaaagcctggccatgcttgagaaagcggccctgcgccttgaa
gcaattcgtgtattggtcgctggctaa
DBGET
integrated database retrieval system
