Pseudomonas versuta: AOC04_02805
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Entry
AOC04_02805 CDS
T04081
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AOC04_02805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsy03021
]
AOC04_02805
Transcription machinery [BR:
ppsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOC04_02805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_28
HTH_23
PhyR_sigma-like
HTH_29
GerE
HTH_11
Phage_NinH
HTH_40
Terminase_5
Phage_antitermQ
FaeA
DUF3080
HTH_24
TnsD
HTH_Tnp_ISL3
DUF722
Motif
Other DBs
NCBI-ProteinID:
ALE87217
UniProt:
A0ABX3EF30
LinkDB
All DBs
Position
complement(599498..600016)
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AA seq
172 aa
AA seq
DB search
MSTGEPAFQAAISNLYCEHHGWLFGWLRRKLGCARNAEDLAQDTFTRILNARESVATLRE
PRAFLSTTARRLIIDQVRRKHIENAYLQELALTAHALEGFQSPEQILTTLEALEHIAFIL
EGMQDKVRQAFVLYYLDGLKQSEIARQLALSDRTVRKYLMQALLHCSHSLDT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgggtgaacctgcgttccaggccgcgatttccaatctgtactgcgagcatcac
ggctggctgtttggctggctgcgaagaaaactcggctgcgcccggaatgccgaagacctg
gcacaagacacctttacccgaattctcaacgcccgcgagtcggtcgccaccctgcgcgag
ccccgggcgtttttgagcacgaccgcacgccgccttatcattgatcaggtgcggcgcaaa
cacatcgaaaacgcctacctgcaagaacttgcgctgaccgcacacgccctcgaaggcttt
caatcacccgagcagatcctcaccacgctggaagcactcgaacacatcgcgttcattctg
gaaggtatgcaggacaaggttcgccaggcctttgtcctgtattacctcgatggcttgaaa
cagagcgagatcgcccggcaactggcgctgtctgatcgtacggtgcgcaagtacctgatg
caggctttgctgcactgcagccatagcctggacacctga
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integrated database retrieval system