Pseudomonas versuta: AOC04_04100
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Entry
AOC04_04100 CDS
T04081
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ppsy
Pseudomonas versuta
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppsy03016
]
AOC04_04100
Enzymes [BR:
ppsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AOC04_04100
Transfer RNA biogenesis [BR:
ppsy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AOC04_04100
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
ALE87444
UniProt:
A0A0M5M1H2
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All DBs
Position
886343..887476
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AA seq
377 aa
AA seq
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MAIDIHWIRDNDSLGQHCAEWQSLPFVALDTEFMRVDTFYPIAGLIQIGDGERAYLIDPL
TIDNWQPLSALLENPAVVKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY
SRLVKEVLDLDLPKGETRSDWLQRPLSETQISYAAEDALHLAEVYVLLRPRLSDEKYAWV
LEDGAELVANLRREVDPYEVYREAKLAWKLSPAQLAVLREICAWREHEARARDLPRNRVV
REHALWPLAKTQPDNLVALARIEDMHPRTVRQDGEFLLDLIKRAASLPPEQWPPAVPEPL
PVEAAALIKRLRAIGQAEAERLNIAPELMLRKKTLEALLKSGFPNGPYQLPDSLRGWRRE
LMGQALLDCLATAGEPS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggattcgcgacaacgatagcctcggccagcattgcgccgaa
tggcagagcctgccattcgtagccctcgacaccgaattcatgcgggtcgacaccttttac
ccgattgccggcctgatccagattggcgacggcgagcgggcttacctgattgaccccctg
accatcgacaactggcagcctttgtccgccctgttggaaaaccctgccgtggtcaaagtg
ctgcacgcctgcagcgaagacctcgaagttctgttacgcctgaccggcagcctgccggcg
ccattgttcgatacccaactggcagcggcttacctgaacctgggcttttccatgggctat
tcgcgcctggtcaaggaggtgcttgacctcgacctgcccaagggtgaaacccgttctgac
tggttgcagcgtccgctgtcggaaacccagatcagctatgccgccgaagatgccctgcat
ctggctgaggtgtatgtgctgctgcgtccgcgcctgtcggatgagaagtacgcctgggtg
ctggaggatggcgccgaactggtggccaatctgcgccgtgaagtggacccttacgaggtg
taccgcgaggccaagctggcctggaagctgtcacccgcacagctggctgtactgcgtgaa
atctgcgcctggcgcgagcatgaagcgcgggcccgtgatctgccgcgcaatcgtgtcgtg
cgcgagcatgccttgtggcccttggccaaaacccagcccgataatctggtggcgctggcg
cgtattgaagatatgcacccgcgtaccgtgcgtcaggatggcgagtttttgcttgatctg
atcaagcgcgctgccagtctgcccccggaacaatggccgccggccgtgcctgagccgttg
ccggtggaagccgccgcgttgatcaagcgactgcgagccatcggtcaggctgaagccgaa
cgcctgaacattgcgccggaactgatgctgcgcaagaaaaccctggaagccctgcttaaa
agtggctttcccaatggcccttatcaattgccggactcactgcgcggatggcgccgtgag
ctgatgggccaggctttgctcgattgcctggccactgctggagaaccgtcttga
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