Pseudomonas versuta: AOC04_05825
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Entry
AOC04_05825 CDS
T04081
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AOC04_05825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsy03021
]
AOC04_05825
Transcription machinery [BR:
ppsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOC04_05825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
HTH_23
HTH_31
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ALE87758
UniProt:
A0ABX3E3U2
LinkDB
All DBs
Position
1289454..1289978
Genome browser
AA seq
174 aa
AA seq
DB search
MSPSPSNPSLLYSDVHALYSDHHVWLVSWLRRRLRDTDNAADMAHDTFLYVLGKPEQVAH
LREPRAWLSSIAKGLLIDRFRRQQVERAYLDAIANLPEQDVPSPQERLILLQTLTRIDAL
LDGLRPRVRTAFLLSRLEGLGYQAIAGRLGVSVSSVEKYMATAIRHCFLARNSL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccatccccgtcgaacccgtcgctgttgtattcagacgttcacgccctctatagc
gaccatcacgtctggctggtgagctggttgcgccggcgcctgcgcgatacagacaatgct
gcggacatggcgcacgacacctttctttatgtactgggcaaaccggagcaggttgcgcat
ttgcgtgagccccgcgcctggttgagcagcatcgccaaaggcttgctgattgaccgcttt
cgtcgccagcaagtcgagcgcgcctatctggacgccatcgccaatttgccggagcaggat
gtgccttcgccccaggagcgcctgatccttctgcaaaccctgacccgcattgatgctttg
ctcgacggcctgaggcccagggtgcggactgccttcttgctgtcgcgcctggaaggcctt
ggctatcaagcaatagccgggcgcctgggggtcagcgtgagttcagtggagaagtacatg
gccacggctatccgccactgttttctggcgcgtaacagtctttga
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