KEGG   Pseudomonas versuta: AOC04_05825
Entry
AOC04_05825       CDS       T04081                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppsy  Pseudomonas versuta
Pathway
ppsy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppsy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AOC04_05825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppsy03021]
    AOC04_05825
Transcription machinery [BR:ppsy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AOC04_05825
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 PhyR_sigma-like Sigma70_ECF HTH_23 HTH_31 HTH_38
Other DBs
NCBI-ProteinID: ALE87758
UniProt: A0ABX3E3U2
LinkDB
Position
1289454..1289978
AA seq 174 aa
MSPSPSNPSLLYSDVHALYSDHHVWLVSWLRRRLRDTDNAADMAHDTFLYVLGKPEQVAH
LREPRAWLSSIAKGLLIDRFRRQQVERAYLDAIANLPEQDVPSPQERLILLQTLTRIDAL
LDGLRPRVRTAFLLSRLEGLGYQAIAGRLGVSVSSVEKYMATAIRHCFLARNSL
NT seq 525 nt   +upstreamnt  +downstreamnt
gtgtcgccatccccgtcgaacccgtcgctgttgtattcagacgttcacgccctctatagc
gaccatcacgtctggctggtgagctggttgcgccggcgcctgcgcgatacagacaatgct
gcggacatggcgcacgacacctttctttatgtactgggcaaaccggagcaggttgcgcat
ttgcgtgagccccgcgcctggttgagcagcatcgccaaaggcttgctgattgaccgcttt
cgtcgccagcaagtcgagcgcgcctatctggacgccatcgccaatttgccggagcaggat
gtgccttcgccccaggagcgcctgatccttctgcaaaccctgacccgcattgatgctttg
ctcgacggcctgaggcccagggtgcggactgccttcttgctgtcgcgcctggaaggcctt
ggctatcaagcaatagccgggcgcctgggggtcagcgtgagttcagtggagaagtacatg
gccacggctatccgccactgttttctggcgcgtaacagtctttga

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