Pseudomonas versuta: AOC04_07120
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Entry
AOC04_07120 CDS
T04081
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppsy
Pseudomonas versuta
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsy03400
]
AOC04_07120
DNA repair and recombination proteins [BR:
ppsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOC04_07120
Archaeal homologous recombinant proteins
AOC04_07120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
AAA_29
SMC_N
DUF5330
AAA_15
ABC_tran
RsgA_GTPase
MMR_HSR1
AAA_22
nSTAND3
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ALE87987
LinkDB
All DBs
Position
complement(1592012..1595653)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LSNTGRDAKVPDADGEVATGDPRTLLRRGTGEGYAEVDFVGIDGRRYRARWEANRAREKA
TGKLQASRQSLRDLDSDQLLASQKGDYKVQLEARLGLNFEQFTRAVMLAQSEFSAFLKAD
DNERSELLEKLTDTALYTRLGKRAFDKAKEARDIHKQLQDQAVGVTPLAPQQRAELDQHY
NEARQQLTNRQIQLKQLEQQHTWLKTLRELQEQQLSAAEQLQHAQTRWDSQADQRHSLNL
LEQLAPQRHQFARLAELDAQSSPLAEQISAHLRQQSVLGEQQTRLQQALQTARLAATQAQ
TGQRESAPLVQQAHLAHANLDRLTQTLSDQQALARQAQQACAEGQQALNQMNERQQQGAE
RLEHIARQLEQSTDQAPLANAWDAYRPRLQQLVRLSNTLSTGHKELPALEQRAERAAREL
NELRNTLEILFQEAEAEPQAVNEQIQTLGSLLTDNRQQQRAFEDLQRLCSSQLALDARLQ
AVQLKLQTLLTEREQLIAQGTATKKQFESAEQALLVTQQLLERQRLARSASVEELRAQLQ
DDQPCPVCGSHEHPYHQPEALLQSLSRFDEEEEANARKVVDGLKETLIQLREKVGGVNAQ
HREFVQQHQQILDEQQSLAPSLEAHALYPQWLAQDPARREQWLSQRLSGLQHSINQDQQR
QNTLLALQKEAAQLQGQVQRSHEASQVAAQQLAEQRLHLNADNQRLADELAQFANLLPAV
TLAALRDNASACFMALDQQVADRLAQLDQQRDEQSEQTERASKIERAQYQQANITKELET
LQRSVLELTAQQQTGQQALTDLLGDYASAQRWQHSLEQAVEQARVAQTEAEQALQASANQ
LLQLAAELKAQQERQHGLQQEHASLSAQVAQWRAQHSELDDSRLQQLLSIDQAQLRELRV
QLQNSEKAVEQARVLLQEREQRLNQHQAQANGNLDAQALDSALNELHSLINASEQQSAEL
RARQAEDQRRQEANQALAQRISQAYDEWQRWARLNALIGSATGDTFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIQV
RRQGNGLSTVEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccatccgcctgaaaaacctcgcctcgctggctggtccttttgaactg
gacttcaccgccgagcccctggccagtgccgggctgtttgcgataaccggccccaccgga
gccggtaaaagcaccctgctcgacgccttgtgcctggcgctgtttggtgccgtaccgcgc
ctgagcaacaccgggcgcgatgccaaggtcccggatgccgatggcgaagtggccaccggc
gaccctcgtaccctgctgcgtcggggtaccggcgaaggctatgccgaagttgactttgtc
ggcatcgacggccgccgttaccgggcccgctgggaagccaatcgcgcccgtgagaaagcc
accggcaagctgcaggccagccgccaaagcctgcgcgacctggacagcgaccaattgctg
gccagccagaaaggcgattacaaagtgcagctggaagcgcgcctggggctcaacttcgag
cagttcacccgcgccgtgatgctggcccagagcgaattcagtgcctttctcaaagccgac
gacaacgagcgcagcgagctgctggaaaaactcaccgacaccgcgctctatacccgcctg
ggcaagcgcgccttcgacaaggctaaagaagcccgcgacatccacaagcaactgcaggat
caggcggtgggcgttaccccgcttgcgccgcaacaacgcgccgagctggaccagcactac
aacgaggcccggcaacagctgactaatcgccaaatccagctcaaacagctggagcaacaa
cacacctggcttaaaaccctgcgcgagctgcaagagcaacagctcagcgccgccgagcaa
ctgcaacacgcccaaacccggtgggacagccaggccgaccagcgccacagcctcaacctg
ctggagcaattggcgccccaacgccatcaatttgcccggctggccgaactggatgcccag
tcaagcccgctggccgaacagatcagtgcccaccttcgccagcaaagcgtgctcggcgaa
caacaaacccggctgcagcaggccctgcaaaccgcccggctggcggccacccaagcccag
accgggcaacgtgaatccgcgccactggtacagcaggcgcacctggcccatgccaacctg
gaccgcctgacccagaccctcagtgaccagcaagcgctggcccggcaggctcaacaggcc
tgtgccgagggtcagcaagccctgaaccagatgaatgagcgccagcaacaaggcgccgaa
cgccttgagcacatagcccgccaactggagcaaagcactgaccaggcccccctggccaat
gcctgggacgcctatcgcccacggttgcagcaactggttcgactgagcaacaccctgagc
accggacacaaggaactacccgccctcgaacaaagggccgaacgggctgcccgggaactg
aacgagctgcgcaacaccctggaaatactgttccaggaagccgaagcagagccacaggcg
gtcaacgagcaaatccagaccctgggtagcctgctcactgataaccgtcagcaacagcgc
gcgtttgaagacttgcagcgcctgtgcagcagccagctcgcactggatgcccgcctgcag
gcggtacaactcaagctgcagactctgctgaccgaacgcgaacagttgatcgcacaaggc
accgcgaccaaaaaacaattcgagtctgccgagcaagccctgctggtcacccaacagctg
ctcgaacgtcagcgactggcccgcagcgccagcgtcgaagagctgcgcgcccagctgcaa
gacgatcagccgtgcccggtctgcggcagccatgagcacccctatcaccagccagaagcg
ctgttgcagagcctctcgcgctttgacgaggaagaagaggccaacgcccgcaaggtggtc
gacggcctcaaggaaaccttgattcagttgcgtgaaaaagtgggcggggtcaatgcccag
caccgcgagtttgtgcagcaacaccagcaaattctcgatgaacaacagagcctggctccg
agccttgaggcccatgcactgtatccacaatggctggcacaagacccggccaggcgcgaa
cagtggctgagccagcgcctgagcgggctgcaacacagcatcaatcaggatcaacagcgc
cagaacaccctgctcgccctgcaaaaagaagcggcgcagttacaggggcaggtgcagcgc
agtcacgaagccagtcaggttgccgcgcaacaactggccgaacaacgcctgcaccttaat
gccgataaccagcggctggcagatgagctggcgcaattcgccaacctgctgccagcggtg
actctcgcggcgctgcgtgataacgcatcagcctgttttatggcgcttgaccagcaagtg
gcggatcgcctggcgcagctggatcaacagcgcgatgaacaatcggaacagactgaacgg
gcgagcaaaatcgagcgggcgcagtatcagcaagccaacatcactaaagagctcgaaacc
ctgcaacgcagcgtgctcgaactgaccgcgcaacagcagacaggccagcaggccctcacc
gacttgctcggcgattacgccagcgcgcaacggtggcagcacagtctggagcaggcagtg
gaacaggcccgcgtggcccagaccgaagccgaacaggccttgcaagccagtgccaaccag
ttgctgcaactggcagccgaactcaaggcacagcaggagcgccagcacgggctgcaacag
gaacacgccagcctcagcgctcaggttgcgcaatggcgcgcgcagcacagcgaactggat
gacagccgtttgcagcagttgctgagcattgaccaagcacaactgcgcgaattgcgcgtg
caattgcaaaacagcgaaaaagcagtcgagcaagcccgcgtcctgctgcaggagcgcgag
caacgcctgaaccagcatcaggcccaggccaatggcaaccttgacgcccaggcgctggac
agcgccttgaatgaactgcacagcctgataaacgccagcgagcagcaatctgccgaattg
cgcgcccggcaagccgaagatcaacgccgccaggaagccaatcaggcactggcacaacgt
atcagccaggcctacgacgaatggcagcgctgggcgcggctcaatgcgctgatcggctca
gccaccggcgacaccttccgcaaaatcgcccaggcctacaacctcgacctgctggtgcat
cacgccaatgcgcaactgcgccaactggtgcgccgttatcgcctcaaacgcggcggcagc
atgctcggcctgttggtgatggacaccgaaatgggcgacgaactgcgctcagtgcattcc
ctgtccggcggtgaaaccttcctcgtatcgctggccctggcattgggtctggcgtcgatg
gcctccagcacgctgaaaatcgaatcgctgtttatcgacgaaggcttcggcagcctcgac
cccgagtcactgcaactggcgatggatgcactggatggcctgcaggcccagggccgcaaa
gtcggggtgatctcccatgtccaggaaatgcacgagcgcataccggtacagatccaggta
cgtcgtcaaggcaacggcctgagcaccgtggaggtcaaatga
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integrated database retrieval system
