Pseudomonas versuta: AOC04_08710
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Entry
AOC04_08710 CDS
T04081
Name
(GenBank) porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy01501
beta-Lactam resistance
ppsy02020
Two-component system
Module
ppsy_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AOC04_08710
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AOC04_08710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsy02000
]
AOC04_08710
01504 Antimicrobial resistance genes [BR:
ppsy01504
]
AOC04_08710
Transporters [BR:
ppsy02000
]
Other transporters
Pores ion channels [TC:
1
]
AOC04_08710
Antimicrobial resistance genes [BR:
ppsy01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
AOC04_08710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
SH3_6
Motif
Other DBs
NCBI-ProteinID:
ALE88276
LinkDB
All DBs
Position
complement(1956493..1957836)
Genome browser
AA seq
447 aa
AA seq
DB search
MTAVHTRSAILLALASPLALADSAQSQSAGLIDDSTWSLVNRTVYDSREYRHGARNSGAR
NAYKPRAERNGYAEEWAYGLMGTLQSGFTQGLIGVGVDAHAYLGVKLDSGGGRAGKARLL
GLDNDGYPKDNFGRGGAAIKLRMSDTVLSWGEQRVKTPVFSSSDSRLLPETATGVFLTSN
ELNALKMVGGHFTGSTDRNASSHDQGFVVNYSNGPKGDAFDLAGVVYTPSKNLSASLYSS
RYEDTWNQHYLGALYSQAIDENHSLTFNFNLYRTTDEGKALSGNIDNTTWSLMSTYAQGP
HSFSLGYQKVHGDTPFDYVTRGAIFLTNAVQLSDFNAPNEQSWQARYDLGMTPWGMPGLV
FSAAYVRGSQIDGSHVDPRGGYAYLGYGKGGKHWERDLEARYVIQSGTAKGTILSLRHNV
HRGNTAQAELDTDQIRLAVEYPLTGRF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgtccatactcgctcggcgatccttctggctctcgcaagccccctggccctg
gccgactccgcgcaatcacagtccgccggcttgatcgatgacagcacctggagcctggtc
aaccgcacggtttacgacagccgcgagtatcgccacggcgcccgcaacagcggagctcgc
aatgcctataaaccgcgcgcggaacgcaatggctatgccgaggaatgggcctacgggttg
atgggcacgttgcaatcaggtttcacccagggcctgatcggggtcggggtggatgcccac
gcctaccttggcgtcaaactggacagtgggggtggccgcgctggcaaggcgcgcctgctg
ggtctggataacgacggctaccccaaggacaacttcggccgtggcggtgcggcgataaaa
ctgcgcatgtcggacaccgtgctgtcctggggcgaacaacgggtcaaaaccccggtgttc
agctcatccgacagccgcctgctgccggaaaccgccactggagtgtttttgaccagcaat
gaattaaatgccctgaagatggtcggcgggcatttcaccgggagcaccgaccgtaacgcc
agcagtcacgaccaaggctttgtggtcaattactccaacggccccaaaggtgatgccttc
gacctggccggggtagtctatacgccgagtaaaaatctcagtgccagcctgtacagctcg
cgctacgaggacacctggaaccagcactatctgggcgccctgtacagccaggcgattgat
gagaaccactcgctgacgttcaacttcaacctgtatcgcaccaccgatgaaggcaaggcg
ctgtcaggcaatatcgacaacaccacctggagcctgatgagcacctacgctcagggcccc
cacagtttcagcctgggttatcagaaggtgcatggcgatacgccgttcgactatgtgaca
cggggagcgatttttctcaccaatgccgtacagctgtctgacttcaacgcgccaaacgaa
caatcgtggcaggcccgttacgacctggggatgacgccgtggggcatgcccggcctggtg
ttcagcgctgcgtatgtgcggggcagccagatcgacggcagtcatgttgacccccgtggc
ggctatgcgtatctggggtatggcaagggcgggaaacactgggagcgtgacctggaagca
cgctatgtgattcagagcggtaccgcgaagggcaccatcctgtcactgcgccataacgtg
catcggggcaatacagcccaggccgaactggataccgatcagatccggctggccgttgaa
tacccgctgaccggacgtttttaa
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