Pseudomonas versuta: AOC04_10485
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Entry
AOC04_10485 CDS
T04081
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOC04_10485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsy03400
]
AOC04_10485
DNA repair and recombination proteins [BR:
ppsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOC04_10485
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOC04_10485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
HAMP
Cauli_AT
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ALE88594
UniProt:
A0A0M5LYB8
LinkDB
All DBs
Position
2367772..2369787
Genome browser
AA seq
671 aa
AA seq
DB search
MPDFQLVTRFEPAGDQPEAIRQMIEGIEAGLSHQTLLGVTGSGKTFSIANVIAHVNRPTL
VLAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLADLQY
TRNDMDFARSTFRVRGDVIDIYPAESDLEAVRIELFDDEVESISAFDPLTGEVIRKMPRF
TFYPKSHYVTPRETLLDAVEGIKEELKERLEYLRTNNKLVEAQRLEQRTRFDLEMIMELG
YCNGIENYSRYLSGRESGAPPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWERISPQTIFVSATPGNYEAEHSGRVVEQVVRPTGLVDPQ
IEIRPALTQVDDLLSEIAKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRREKQIAFNLANGITPKGVFKDVADIMEGAVV
PGSRSKKRKGMAKAAEENAKYENELRSPSEISKRIRQLEEKMYALARDLEFEAAAQMRDE
IGKLRERLLQV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatttccagctagttacccgcttcgagcctgcgggcgatcaacccgaagccatt
cgccagatgatcgaaggcatcgaagccgggctgtcgcaccagaccctgctcggggtaacg
ggctcgggcaagaccttcagcatcgccaacgtcatcgcccatgtgaatcgcccgacgctg
gtgctcgcccccaacaaaaccctcgcggcgcagctgtacggcgagttcaagtcgttcttc
cccaacaacgcggtggagtacttcgtctcgtactacgactactaccagcccgaagcctat
gtgccctcctccgatacctttatcgagaaagacgcctcgatcaacgaccacatcgagcaa
atgcgcctgtctgcgaccaaggcgttgctggagcgcaaggacgcaatcatcgtcaccacg
gtgtcgtgcatttacggcctgggcagcccggaaacctatttgaagatggtgttgcacgtt
gatcgcggtgacaaactcgatcagcgcgaactgctgcgccgtctggccgacctgcaatac
acccgcaacgacatggacttcgcccgctcgacattccgggtacgcggcgatgtgatcgac
atctacccggctgaatccgacctcgaagccgtgcgcattgaactgttcgatgatgaagtc
gaaagcatcagcgcctttgacccgctgaccggcgaagtcatccgcaagatgccgcgcttt
accttctacccgaaaagccactacgtaacgcctcgcgaaaccctgctggacgcggtcgaa
ggcatcaaggaagagctcaaggagcgcctggagtacctgcgcaccaataacaaactggtc
gaggcccagcgccttgagcaacgcacccgctttgatctggaaatgatcatggagctgggt
tactgcaacggtatcgaaaactactcgcgctacctctcgggtcgcgagtccggagccccg
ccgccgaccctgttcgactacctgccggccgacgcgttactggtgatcgatgagtcccac
gtcagcgtgccgcaagtgggcgcgatgtataaaggcgaccgttcgcgcaaagagacactg
gtggagtacggcttccgcttgccgtcggccctggataaccggccgatgcgttttgacgaa
tgggaacgcatcagcccccagaccattttcgtctcggccacccccggcaactacgaggcc
gagcattcgggccgggtcgtggagcaagtggtgcgtccaaccggcctggtggacccgcaa
atcgaaatccgcccggcgctgacccaggtcgacgacctgctgtccgaaatcgccaagcgc
gtggcactggaagaacgggtactggtgacgacgctgaccaagcgcatgtccgaagacctc
actgattacctggccgaccacggcgtacgtgtgcgctacctgcactcggacatcgacacc
gtggaacgggtcgagatcatccgcgatttgcgcctcggcgtgtttgacgtgctggtgggg
atcaacctgctgcgcgaaggcctggacatgcctgaagtgtcgctagtggcgattctcgat
gccgacaaggaaggcttcctgcgttccgagcgctcattgatccagaccattggccgtgct
gcccgtaacctcaatggccgtgcgatcctgtacgccgaccggataaccggctcgatggaa
cgggcgattggcgagaccgaacgccgtcgcgaaaaacagatcgccttcaacctggcgaac
ggaattacacccaagggcgtattcaaggatgtcgccgacatcatggaaggcgcagtggta
ccaggctcgcgcagcaaaaagcgcaaaggcatggccaaggctgccgaggaaaacgccaag
tacgaaaacgaactgcgttcaccgagcgaaatcagcaagcgcatccgccagctggaagaa
aaaatgtacgccctggcccgcgacctggagttcgaggcagccgcgcaaatgcgtgacgaa
atcggcaagctcagagagcggttgctgcaggtttaa
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integrated database retrieval system
