KEGG   Pseudomonas versuta: AOC04_13705
Entry
AOC04_13705       CDS       T04081                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
ppsy  Pseudomonas versuta
Brite
KEGG Orthology (KO) [BR:ppsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsy03032]
    AOC04_13705
   03036 Chromosome and associated proteins [BR:ppsy03036]
    AOC04_13705
   03400 DNA repair and recombination proteins [BR:ppsy03400]
    AOC04_13705
DNA replication proteins [BR:ppsy03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AOC04_13705
Chromosome and associated proteins [BR:ppsy03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AOC04_13705
DNA repair and recombination proteins [BR:ppsy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AOC04_13705
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: ALE89170
UniProt: A0A0M5LVZ0
LinkDB
Position
complement(3079402..3079674)
AA seq 90 aa
MNKSELIDAIAASADIPKAAAGRALDAVIESVTGALKAGDSVVLVGFGTFSVTDRPARTG
RNPQTGKTLEIPAAKKPGFKAGKALKEAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagtcggaactgattgatgctatcgctgcatctgctgatatcccgaaagctgca
gctggccgtgcgctggacgcagtaatcgaatccgtcactggcgctcttaaggctggcgac
tctgtggtactggttggttttggtactttctctgtgactgatcgcccggctcgcactggt
cgtaacccgcagactggtaaaacgctggaaattcctgctgctaaaaaaccaggcttcaaa
gccggtaaagcgctgaaagaagcggttaactaa

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