Pseudomonas versuta: AOC04_13705
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Entry
AOC04_13705 CDS
T04081
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ppsy
Pseudomonas versuta
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsy03032
]
AOC04_13705
03036 Chromosome and associated proteins [BR:
ppsy03036
]
AOC04_13705
03400 DNA repair and recombination proteins [BR:
ppsy03400
]
AOC04_13705
DNA replication proteins [BR:
ppsy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AOC04_13705
Chromosome and associated proteins [BR:
ppsy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AOC04_13705
DNA repair and recombination proteins [BR:
ppsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AOC04_13705
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ALE89170
UniProt:
A0A0M5LVZ0
LinkDB
All DBs
Position
complement(3079402..3079674)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAAAGRALDAVIESVTGALKAGDSVVLVGFGTFSVTDRPARTG
RNPQTGKTLEIPAAKKPGFKAGKALKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgatgctatcgctgcatctgctgatatcccgaaagctgca
gctggccgtgcgctggacgcagtaatcgaatccgtcactggcgctcttaaggctggcgac
tctgtggtactggttggttttggtactttctctgtgactgatcgcccggctcgcactggt
cgtaacccgcagactggtaaaacgctggaaattcctgctgctaaaaaaccaggcttcaaa
gccggtaaagcgctgaaagaagcggttaactaa
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