Pseudomonas versuta: AOC04_15080
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Entry
AOC04_15080 CDS
T04081
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy03030
DNA replication
ppsy03430
Mismatch repair
ppsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOC04_15080
03430 Mismatch repair
AOC04_15080
03440 Homologous recombination
AOC04_15080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsy03032
]
AOC04_15080
03400 DNA repair and recombination proteins [BR:
ppsy03400
]
AOC04_15080
Enzymes [BR:
ppsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOC04_15080
DNA replication proteins [BR:
ppsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOC04_15080
DNA repair and recombination proteins [BR:
ppsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOC04_15080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
ALE89424
UniProt:
A0A853ZVN4
LinkDB
All DBs
Position
complement(3364549..3368070)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLIKTLAGMNMPAVAVTDQNNMCSLVKFYKAAMGGG
IKPICGADLWLSNKDPENPVSRLSLLAMNGVGYRNLTELISRGFIDGQRNGQVIIEREWV
AEAAEGLIMLSSAKEGEIGIALISGNTEEAEVLAREWMTVFPDRFYLEVQRTKRPNDEEH
LHAAVALAETVGAPLVATNDVRFLKQEDFEAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMAELFSDLPEALANSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EDRLSVLLPKDTTEDYDARRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGLV
TQFDKDDVESAGLVKFDFLGLRTLTVIDWALKTINRDRAKVDEPPLDIAFIPLDDKPTYQ
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCANNNIDGDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEIRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFTDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPFFHDEP
KAWQASIDQNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEADADVYANHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFAEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTSLAESLRLKVAQSALKGDQLRWLGDLFKKHRGACPITMEYTGVGAKAT
LQFGETWRIDPADSLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcacctgcgcctgcacactgaatactccctggtcgatggcctg
gtgcggatcaaaccgctgatcaaaaccctggccggcatgaacatgcctgccgtagcggtg
acggatcagaacaacatgtgttcgttggtcaaattctataaagcggccatgggcggcggg
atcaagccgatttgtggcgctgacctgtggctgtcgaacaaggatccggagaacccggtg
agccgtctcagtcttctggcgatgaacggcgtcggctatcgcaatctgaccgagttgatc
tcccggggcttcattgatggccagcgtaacggccaggtcatcattgagcgcgagtgggtg
gccgaagctgcagaaggcctgatcatgctctcgtcagccaaagagggtgaaattggcatc
gcgctgatcagtggcaacactgaagaggccgaggttctggcccgcgaatggatgaccgta
ttcccggaccggttctatctcgaggttcaacgcaccaaacgccccaatgacgaagagcac
ttgcacgcggcagtggcgctggctgaaacagtcggcgcgccgctggtggcgaccaacgat
gtgcgtttcctcaagcaagaggacttcgaagctcacgaaacccgtgtatgcatcggtgaa
ggccgggcgctggatgacccgcgccgctccaagaactacagcgatcagcaatatctgaaa
agcgccgaagaaatggccgagctgttcagtgacttgcccgaagcactggccaactcggta
gaaatcgccaagcgctgcaacatcgaagtgaagctgggcaaacactttttgcccaacttc
ccgattcccgatggcatgaccatcgatgagtacttccgcaaggtgtcctttgacggtctg
gaagatcgcctcagcgttctgttgcccaaagacaccaccgaagattacgacgcccggcgc
caggtttatgttgaccggctgaatttcgagctggatatcatcatccagatggggtttccc
ggctacttcctgatcgtaatggactttatccagtgggctaaaagcaatggcgtgcccgtg
gggccgggtcgagggtcgggtgccggctcgctggtggcttatgtacagaagatcacagac
cttgatccgctggaatacgacctgctgttcgagcgattccttaacccggaacgggtatcg
atgcccgacttcgacgtcgacttctgcatggacggtcgggaccgggtcattgagtatgtg
gccgaaaaatatggccgcaacgcagtaagccagatcattacctttggttcgatggctgcc
aaggcggtaatccgtgacgtggcgcgggtgcagggcaagtcctacggcttggccgatcga
ctgtcgaagatgattccgttcgaagtcggcatgaccctggaaaaagcttatgagcaggaa
gaaatcctgcgtgactttatcaaggtcgatgaagaagccgctgaaatctgggacatggcc
cgcaagcttgagggcgtagtccgtaacgtcggcaagcacgcgggtggtgtggtcatcgcg
ccgaccaaacttaccgacttttcgccgatttattgcgacgaagagggcggtggcctggta
acccagttcgacaaggacgacgttgagtctgccggtctggtgaagttcgacttcctgggg
ctgcggaccctgacggtcatcgactgggcgctgaaaaccatcaaccgtgatcgcgccaag
gtggatgaaccacccctggatatcgccttcatcccgctggacgacaagccgacgtatcaa
ctgctgcagaaagctgaaaccacggcggtcttccagcttgagtcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacttgattgcattggtggccctgttc
cgtccggggccgctgcagtcaggcatggttgatgactttatcaaccgtaaacacggtcgc
gccgaactggcgtatccgcattcggactaccagtacgaaggcctcaagccggtattggcc
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtcatggct
ggttataccctcggcggcgctgacatgctgcgtcgggccatgggtaagaaaaagcccgaa
gaaatggccaagcagcgcggcggctttatcgaaggttgtgccaacaacaatattgatggc
gaccttgccggtaacatttttgacctggtagagaaatttgccggttatggctttaacaaa
tcccactctgctgcctacggccttgtgtcgtaccagacggcatggctgaaaacccattac
ccggcaccgttcatggctgcggtactgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaaattcgcaccatgaagctgcgtctcgacgcgccggatgtgaatgct
tcggagttcaagttcacggttaatgacgagggccggatcatttacgggctgggcgccatc
aagggcgtaggcgaggggccggtagaggctatcaccgaagctcgccaggacggcccgttc
accgatttgttcgatttctgcgcccgggtcgacctcaagcgtattaacaaacgaacgctc
gatggtctgattcgtagcggagcgctggaccgtctcgggccgtttttccatgatgaaccc
aaggcctggcaggcgagtatcgaccagaaccgcgcagtattgctggctgcaatggaagag
gcgatcaaggctgcggaacaaaccgcgcgcacccacgacagcgggcatgccgacctgttt
ggcggcctgttcgtcgaggcggatgccgatgtctacgccaatcatcgcaaagcgaaagaa
ctgacgcttaaagagcgcctcaaaggcgagaaagatactctgggcctgtacctgacaggt
cacccgattgacgagtatgaaggtgaaattcgccgttttgcccgtcagcgcatcattgat
ctcaagccggcccgggatacccagaccgtcgccggcatgatcatcgcgttgcgggtcatg
aagaacaaaaaaggcgacaagatgggcttcatcaccctcgacgaccggtcggggcggatt
gaagcatcgctgtttgccgaggcgttccattcggcacagtcgctgttgcagaccgatgcc
atggtggtggtcgaaggtgaggtcagcaatgacgacttctccggcgggttgcgtttgcgg
gtcaagcgggtgatgagcatggaagatgcccgcaccagcctggccgagagcctgcgtctg
aaagttgcacagtccgcgcttaaaggtgatcaactgcgctggctgggcgatttgttcaag
aaacaccgcggggcgtgcccgatcactatggaatacaccggtgtgggcgccaaggcgacg
ctgcagtttggcgagacctggagaattgatccggctgacagcttgattcaagcgttgcgt
gaccagtttgggcgagacaacgtcttcctccaataccgttga
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