KEGG   Pseudomonas versuta: AOC04_15455
Entry
AOC04_15455       CDS       T04081                                 
Name
(GenBank) RNA-binding protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ppsy  Pseudomonas versuta
Pathway
ppsy02024  Quorum sensing
ppsy03060  Protein export
ppsy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AOC04_15455
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AOC04_15455
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AOC04_15455
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppsy02044]
    AOC04_15455
Enzymes [BR:ppsy01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AOC04_15455
Secretion system [BR:ppsy02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AOC04_15455
  Eukaryotic Sec-SRP protein
   AOC04_15455
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin cobW AAA_22 APS_kinase YqeC AAA_33 nSTAND3 6PF2K AAA_31 Thymidylate_kin KTI12 AAA_24 AAA_16 AAA_30 ABC_tran AAA_5 ATP_bind_1 AAA_18 NACHT AAA_19 SLFN-g3_helicase TsaE DUF3731
Other DBs
NCBI-ProteinID: ALE89495
UniProt: A0A0M3UEF6
LinkDB
Position
complement(3449444..3450820)
AA seq 458 aa
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVSAVKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLVLNVTPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKTVMVVSVDVYRPAAIKQLETLAGEVGVTFFPSDISQNPVSIALAAIAEAK
LKFIDVVIVDTAGRLHIDAEMMTEIQELHAAVKPAETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRSITGKPIKFIGMGEKSDALEPFHPDRIASRILGMGDV
LSLIEQAEQTLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPNMGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPDLISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGSMMPGGGMPKM
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtttgaaaatttaaccgatcgtctctcgcagacgctgcgccatgttaccggcaaggcc
aagctgaccgaggacaacatcaaagacaccctgcgtgaagtgcgcatggcgttgctggaa
gccgacgtggctttgccagtggtcaaggacttcgtcagcgcggtcaaagagcgcgctgtc
ggcactgaagtgtcgcgcagcctgacgccgggccaggcgtttgtgaagatcgtccaggcc
gagcttgaaagcctgatgggcgctgccaacgaggacctggtcctcaatgtcacgccacct
gctgtagttttgatggccggtttgcagggtgcgggtaaaaccaccaccgccggcaagctg
gcgcgcttccttaaagagcgcaaaaagaaaaccgtcatggtggtctcggtcgacgtttac
cgtcctgcggcaatcaaacagctggaaaccctggcgggcgaagtgggcgttacgttcttc
ccgtccgatatcagccagaacccggtgagcattgcgctggcggccattgccgaagccaaa
ctcaagttcattgatgtagttattgtcgataccgcgggtcgtttgcacatcgacgccgag
atgatgactgaaatccaggagctgcacgcggccgtcaagcctgcagaaaccctgttcgtc
gtcgacgccatgaccggtcaggatgccgccaacacggccaaggctttcggtgatgcattg
ccgctcaccggtgtgatcctgaccaaggtcgacggtgatgcccgtggtggtgcggcattg
tccgtgcgctcgatcactggcaagccgatcaaattcatcggtatgggcgagaagagcgat
gctctggagccgttccatcccgatcgtattgcatcgcgcatcctcggcatgggcgacgtg
ctcagccttatcgagcaagctgaacagactctcgataaagacaaagccgacaaactggcg
aaaaagctcaagaagggtaaaggcttcgacctcgaagacttccgcgaccagctgcagcag
atgaaaaacatgggcggccttggcggcctcatggacaaactgccaaacatgggcggtgtg
aatctggcgcaaatgggcaatgcccagggcgcagcagaaaagcagttcaagcaaatggaa
gccatcatcaactccatgaccccggccgagcgccgtgaccctgacctgatcagtggttcg
cgcaaacgccgtattgccatgggttccggcacccaggtgcaggacatcgggcgcttgatc
aagcagcacaagcagatgcaaaagatgatgaagaagttctccgcaaaaggcgggatggcc
aaaatgatgcgcggcatgggctcgatgatgcctggcggcggcatgccaaaaatgtaa

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