KEGG   Pseudomonas versuta: AOC04_15565
Entry
AOC04_15565       CDS       T04081                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ppsy  Pseudomonas versuta
Pathway
ppsy03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppsy00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AOC04_15565 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsy03019]
    AOC04_15565 (rnc)
   03009 Ribosome biogenesis [BR:ppsy03009]
    AOC04_15565 (rnc)
   03036 Chromosome and associated proteins [BR:ppsy03036]
    AOC04_15565 (rnc)
Enzymes [BR:ppsy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     AOC04_15565 (rnc)
Messenger RNA biogenesis [BR:ppsy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AOC04_15565 (rnc)
Ribosome biogenesis [BR:ppsy03009]
 Eukaryotic type
  90S particles
   RNase
    AOC04_15565 (rnc)
 Prokaryotic type
  rRNA processing factors
   AOC04_15565 (rnc)
Chromosome and associated proteins [BR:ppsy03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     AOC04_15565 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm MmeI_N
Other DBs
NCBI-ProteinID: ALE89516
UniProt: A0ABX3E2T3
LinkDB
Position
complement(3475198..3475887)
AA seq 229 aa
MSFSLERLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
LAREGQLSRLRARLVKGETLAVLARGFELGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEAARDRVLAWLASEFETLTLVDTNKDPKTRLQEFLQSRACDLPRYEVVDIQG
EPHCRMFFVECEIALLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagtttttctttagagcgtttagagcgtcagctcggctataccttcaaggaccaggaa
ctgatggttctggccctgacacaccgcagtttcgcggggcgcaacaatgagcgcctcgag
ttcctgggggatgccatcctcaattttgtagccggcgaagcattgtttgaccgcttcccg
ctggcccgtgaaggccaactgtcccgtctgcgtgcccgtctggtaaaaggcgaaaccctg
gccgtgctggcccgtggttttgagttgggtgaatacctgcgtctgggctcgggcgaactg
aaaagcggtggctttcgccgtgagtcgattttggccgatgcccttgaagcgctgatcggc
gccatttacctggatgcgggcatggaagccgctcgtgaccgcgtattggcctggcttgcc
agtgagttcgagactctgaccctggtcgacaccaataaagatccaaagacccggctgcaa
gagttcttgcagtcgcgtgcctgtgacctgccacgttacgaagtggtggatatccagggc
gaaccgcattgccgcatgttcttcgttgagtgcgaaattgccctattgaatgaaaaaagc
cggggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgccgcagcactgata
gcccttggcgtggagaatggccatgactga

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