Pseudomonas versuta: AOC04_16295
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Entry
AOC04_16295 CDS
T04081
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppsy
Pseudomonas versuta
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsy03400
]
AOC04_16295
Enzymes [BR:
ppsy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AOC04_16295
DNA repair and recombination proteins [BR:
ppsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AOC04_16295
Prokaryotic type
AOC04_16295
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ALE89653
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All DBs
Position
3623329..3624774
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AA seq
481 aa
AA seq
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MQLIWLRSDLRQSDNTALSAAAARGPTVAVYLISAEQWLAHDDAPCKVDFWLRNLSVLSD
SLEQLNIPLLIRSAPAWDQAPAALVELCQQLGIQDVHVNDEYGIHETRRDQAVACALDAQ
GIGFHRYLDQLLFQPGSVLTKTGGYFQVFSQFRKVCYERLHTGLPGIVAKPQAQAPLSIA
RDRVPESVTGFARPGQSLRALWPAGEEEARERLARFADEQIHYYKEERDLPAKPGTSQLS
PYLAAGVISPRQCLHAALLSNNGEFESGSVGAATWISELIWREFYKHILVGYPRVSRHRA
FRPATEFLPWRDAPQELAAWKEGRTGIPIIDAAIRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMQHLIDGDLAANNGGWQWSSSTGTDSVPYFRIFNPLSQSERFDPEGRFIK
HWLPELATLNKKEIHNPASAGGLFGVADYPQPIVDLKHSRERALSAFKNLPRHQLYEVCD
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgatttgcgccaaagcgacaacactgccctgagcgcc
gccgctgcacgcggccccactgtggccgtgtacctcataagcgccgagcaatggctggcc
catgatgatgcgccatgcaaagtcgacttttggctgcgtaacctgagcgtcctgagcgac
agcctcgaacaactgaatatcccgttactgattcgcagcgcacccgcctgggaccaggcc
cccgcggcgcttgttgagctgtgccaacaactgggcattcaggatgttcatgtaaatgat
gaatacggcatccatgaaacccggcgcgatcaggccgtcgcctgcgcactcgacgcccaa
ggcatcggctttcatcgctacctcgaccaactgttgtttcagcccggcagcgtgctgacc
aaaaccggggggtactttcaggtcttcagccagttccgcaaggtttgctatgagcgcctg
catacggggctgccgggcatcgtggccaaaccacaggcacaggcgccgctgtcgattgcc
cgggatcgcgttcctgaatctgttaccggctttgcccggcccggccaatccttgcgtgca
ctgtggccggctggggaagaagaagcccgggagcgcctggcacgcttcgccgatgagcaa
atccactactacaaagaagaacgcgacttacccgcaaaacctggcaccagccagctttcg
ccctacctggcagcaggcgttatctcaccacgccaatgcctgcatgccgcactgctaagc
aacaacggcgagtttgaaagcggcagtgtcggtgccgcgacctggatcagcgaactgatc
tggcgcgagttttataaacacattcttgtgggctacccacgggtttcccggcaccgcgca
ttcaggcctgccaccgagttcctgccctggcgtgacgccccgcaggagctggcagcctgg
aaagaaggccgcaccggcatcccgatcatagacgcggccattcgccaactgctcgaaacc
ggctggatgcataaccgcctgcggatggtggtggcgatgtttctgaccaaaaacctgttg
atcgactggcgcgagggtgagcgcttctttatgcagcacttgattgatggtgacctcgca
gccaacaacggtggctggcagtggagttcatccaccgggaccgactcggttccctacttc
agaattttcaacccgctgagccagtccgagcgcttcgaccccgaagggcgcttcatcaag
cactggctgccagagctcgcaacgttgaataaaaaggaaatccacaacccggccagtgct
ggaggcctgtttggcgttgccgactacccgcagccgatagtcgacttgaaacacagccgc
gagcgggccctcagcgccttcaaaaatctgccgaggcatcagctctatgaggtgtgtgat
gactga
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