Pseudomonas versuta: AOC04_17225
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Entry
AOC04_17225 CDS
T04081
Name
(GenBank) RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ppsy
Pseudomonas versuta
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsy03000
]
AOC04_17225
Transcription factors [BR:
ppsy03000
]
Prokaryotic type
Helix-turn-helix
Other families
AOC04_17225
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
LacI
TrwC
Motif
Other DBs
NCBI-ProteinID:
ALE89823
UniProt:
A0A0M4QS07
LinkDB
All DBs
Position
complement(3836609..3837469)
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AA seq
286 aa
AA seq
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MDILYQIRVRQDTFSAAEARIARLMLSDIAFAANASLDELALRAEVSSATLSRFARSVGC
RDLRDLRLQLAQASGVGKRFLDTGSMPEQSAFFRQILSDIESTLHEHLAGFNGVHFADAV
RLLGEAKMIHAFGMGGSSSVYSDELQVRLVRLGYPVASCRDVVMMRITAATLGPEHAVIV
CSLTGLTPELIDVVRLAHNYGAKVIAITRPDTPLAQLADVVLALQGVETSFIYKPTAARY
GMMLAIDVLSTELALSMPEANQERLRRIKLALDDYRGGDDCLPLGD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctgtatcaaatccgggttcgtcaggacaccttcagcgccgccgaggcccga
attgcccggctgatgctcagcgatatcgcttttgccgcgaacgccagccttgacgagctg
gcgctgcgggccgaggtcagcagcgccacgttatcgcgctttgcccgcagtgtcggctgc
cgcgatttgcgagacttgcgtctgcagctggcgcaggccagcggggtgggcaagcgtttt
ctcgataccggcagcatgcctgagcagtcggctttttttcgccagatcctgagtgatatc
gaatcgaccttgcacgagcatctggccggcttcaatggcgtgcattttgccgatgcggtc
aggttgctgggcgaggcgaaaatgattcatgcgttcggcatgggcggcagttccagcgtg
tacagcgatgaattgcaggtgcgtctggtgcgcctgggctatcccgtggcgtcctgtcgc
gacgtggtgatgatgcggatcacggcggccacgctgggcccggagcatgcggtgattgtg
tgctcgctgaccggcctgaccccggagttgatcgatgtggtcaggctggcccacaactat
ggcgccaaagtgatcgccatcacccggcccgatacgcctctggcgcaattggccgatgtg
gtgctggcgctgcaaggggtggaaaccagcttcatctacaaacccacggcggcccgttac
gggatgatgctggccattgacgtactttccaccgagctggcgctgtcgatgcctgaagcc
aatcaggagcgcttgcgccggatcaaactggcactggatgactatcgtggcggcgacgac
tgcctgccattgggggattga
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